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Add article with example of interfacing with Stan model#90

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matt-graham merged 6 commits into
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mmg/bridgestan-article
Aug 7, 2025
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Add article with example of interfacing with Stan model#90
matt-graham merged 6 commits into
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mmg/bridgestan-article

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Adds an article illustrating how to use rmcmc to sample from posterior distribution defined by a Stan model, using the real-world example of the Hodgkin-Huxley model for action potential generation fitted to voltage clamp experimental data from Hodgkin and Huxley's 1952 paper.

Should resolve #85

Ideally this would also include and example of posterior predictive checks using bayesplot but this will require fixing #89.

@matt-graham matt-graham added the documentation Improvements or additions to documentation label Aug 4, 2025
@matt-graham matt-graham marked this pull request as ready for review August 7, 2025 18:53
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codecov Bot commented Aug 7, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 100.00%. Comparing base (4852998) to head (04e6b24).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
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  Coverage   100.00%   100.00%           
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  Files           11        11           
  Lines          580       580           
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  Hits           580       580           

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@matt-graham matt-graham merged commit 9cc3c3d into main Aug 7, 2025
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@matt-graham matt-graham deleted the mmg/bridgestan-article branch August 7, 2025 19:56
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Add real-world example

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