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Running summary#40

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mduncans merged 23 commits intomainfrom
running-summary
Feb 9, 2026
Merged

Running summary#40
mduncans merged 23 commits intomainfrom
running-summary

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@mduncans mduncans commented Feb 9, 2026

adds running and not_run run status printouts for summary(mod)

── Model: 1001 ───────────────────────────────────────────────────────────────────────────────────────────────────────
Run Status: Not Run
Problem: PK Structural Model
Dataset: ../../../../data/derived/PK_Oral_Ex1.csv

ℹ This model has not been executed. To run it, use one of:
• submit_model_to_slurm()
• submit_model_to_sge()

── Running Model: 1001 ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
ℹ Model is currently running

── Recent Iterations ──
 
 
iteration  method  THETA1  THETA2  THETA3  THETA4  SIGMA.1.1.  SIGMA.2.1.  SIGMA.2.2.  OMEGA.1.1.  OMEGA.2.1.  OMEGA.2.2.  OMEGA.3.1.  OMEGA.3.2.  OMEGA.3.3.
─────────  ──────  ──────  ──────  ──────  ──────  ──────────  ──────────  ──────────  ──────────  ──────────  ──────────  ──────────  ──────────  ──────────
0          FOCE    19      304     2       1       0.1         0           2           0.1         0           0.1         0           0           0.1       
5          FOCE    17.96   245.3   2.424   1       0.0702      0           2.353       0.08704     0           0.04067     0           0           0.1202    
10         FOCE    18.53   232.3   2.352   1       0.0668      0           18.35       0.1173      0           0.04361     0           0           0.2152    
── Recent Gradients ──
 
 
iteration  method  GRD.THETA1.  GRD.THETA2.  GRD.THETA3.  GRD.ETA1.  GRD.ETA2.  GRD.ETA3.  GRD.EPS1.  GRD.EPS2.
─────────  ──────  ───────────  ───────────  ───────────  ─────────  ─────────  ─────────  ─────────  ─────────
0          FOCE    20.43        315.6        -175.8       14.13      -6.896     -19.93     180        -4.049   
5          FOCE    -29.72       71.89        6.891        1.462      -17.65     -11.07     -10.74     -6.071   
10         FOCE    2.311        -30.64       8.48         29.89      -7.31      23.91      29.98      -8.24   

Exposes from_config_relative() to convert the path attributes stored on models and trees from relative to pharos.toml to absolute path.

@mduncans mduncans merged commit a6e174f into main Feb 9, 2026
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@mduncans mduncans deleted the running-summary branch February 11, 2026 15:53
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