Analysis of NGS data for Luc7 mutants. This repo is associated with UNNAMED_LUC7_PUBLICATION.
./CountingScripts/ has the scripts used to count the bam files. ./Data/ has the outputs from the counting scripts.
FinalFigures.Rmd has all of the code used to generate panels ./AnnotationFiles/ has all of the annotation files for the introns. ./Panels/ has the raw plots as well as .ai files for making the final panels
./SRA_metadatafiles/ has the excel sheets used to submit the raw data to the SRA.