Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
ants.apply_transformsdid not work withimagetype=1, because of problems with the pointer casting in ANTs. Unfortunately, this failure was hidden because the apply_transforms python function just returned a copy of the input. This is now changed such that an exception is raised if the C++ call exits with a nonzero status.This also means that the build_template function was not working - the template deformable shape update was just not happening.
I added tests to check vector resampling and reorientation works now.