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neely edited this page Jun 17, 2015 · 20 revisions

Welcome to the ComplementaryDomainPrioritization (CDP) Wiki!

  1. Installation

  2. Prioritization
    a. Enrichment analysis of secondary domain

    1. Pathway enrichment analysis with WebGestalt
    2. Gene set enrichment analysis with WebGestalt b. Gene list prioritization using enrichment restults
    3. Gene list prioritization using KEGG
    4. Gene list prioritization using WikiPathways
    5. Gene list prioritization using MSigDB Transcription Factor Target

  3. Filtering
    a. Independent filters

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