Skip to content

v0.1.0-rc1

Pre-release
Pre-release

Choose a tag to compare

@Rdornier Rdornier released this 19 May 08:53
· 121 commits to main since this release

This is the first release candidate for qupath-spotiflow. At this time, it only works on windows machines, beacuse the way spotiflow is managed in the python environment is not exactly the same as for cellpose.

  • Spotiflow prediction is fully supported, with pre-trained model and custom models
  • Spotiflow training is not supported yet
  • Only one channel is processed at a time, even if multiple channels are passed in arguments
  • You have an option to not resave prediction images if they are already saved
  • a help is available by calling spotiflow.helpPredict() after the builder creation

The source code has to be cleaned from all qupath-cellpose methods that are not used anymore.