Migration to QuPath 0.6.x
This release make the extension compatible with QuPath 0.6.x and fixes a bunch of bugs / features
Bug fix
- Enable to use MAC GPU option (thanks to @AlbertDominguez in #8)
- When running spotiflow on multiple channels, all the points for all the channels are now correctly displayed - fix #11
- Forcing
minDistanceparameter to be an integer number - fix #12 - Correctly handle
waitFor()process on Mac systems - fix #15 - Try to separate UI code in a separate JavaFX thread - fix #15
- Remove points ouside parent shape - fix #14
- Fix compatibility with spotiflow 0.5.7 and 0.5.8 - fix #13
- Fix warning on null PathClass by using
.resetPathClass()instead
New feature
- Saving temp images as OME-Zarr files (only from spotiflow 0.5.8) - fix #9 and #2
- Set options to clear child object or not
- Set option to save the builder
Refactor
- Add a supplementary folder layer in the temp dir to separate shapes between images
- Run spotiflow command only once, even if multiple channels/parents are selected
- Refactor
savePredictionImagestocleanTempDir - Update github actions