Fix pypandoc issue in CI #397
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eb8680
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Nov 14, 2025
eb8680
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Dec 4, 2025
* Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * lint --------- Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> Co-authored-by: Eli <eli@basis.ai>
jfeser
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Dec 5, 2025
* Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (#425) --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com>
datvo06
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Dec 8, 2025
* Release v0.2.3 (BasisResearch#374) * Install prettyprinter for term when library is available (BasisResearch#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (BasisResearch#397) * Convert evaluate to a singledispatch (BasisResearch#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (BasisResearch#394) * Deprecate defterm (BasisResearch#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (BasisResearch#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around BasisResearch#310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around BasisResearch#312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (BasisResearch#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (BasisResearch#405) * Fix recursion error in sizesof (BasisResearch#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (BasisResearch#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * lint --------- Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> Co-authored-by: Eli <eli@basis.ai>
datvo06
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Dec 8, 2025
* Release v0.2.3 (BasisResearch#374) * Install prettyprinter for term when library is available (BasisResearch#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (BasisResearch#397) * Convert evaluate to a singledispatch (BasisResearch#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (BasisResearch#394) * Deprecate defterm (BasisResearch#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (BasisResearch#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around BasisResearch#310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around BasisResearch#312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (BasisResearch#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (BasisResearch#405) * Fix recursion error in sizesof (BasisResearch#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (BasisResearch#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (BasisResearch#425) --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com>
datvo06
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Dec 9, 2025
* Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (#425) --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com>
kiranandcode
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Dec 9, 2025
* Logging retries * Remove redundant assignment * Linting * Adding mypy check and test * SynthesizedFunction for constrained decoding, adapt the tests * Linting * Let LLM generate param names * Pydantic field annotation * Adding validation error example * Linting * Fix minor formatting for type context * Update llm dependencies to include mypy * More comprehensive error message * linting * More comprehensive import * Fix `staging-llm` diff against `master` (#426) * Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (#425) --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> * Logging retries * Make linter happy with the exception_cls * More linting * Revert the changes to synthesis, it belongs to a different PR * Add test for retry handler * More linting * Removing mypy for llm --------- Co-authored-by: eb8680 <eb8680@users.noreply.github.com> Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com>
eb8680
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Dec 12, 2025
* Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (#425) * Generate instance-level `Operation`s for bound methods (#351) * generalize __get__ * nits * coverage of methoddescriptor api * methodtype * simplify * simplify * simplify * format * revert * restore * simplify * simplify * retain instance op on term construction * Simplify apply inheritance * assign * put call next to init_subclass * add explanatory comment * Operation.apply -> Operation.__apply__ * add test based on issue description * fix doctest * Fix dataclass @defops and added dataclass metaclass (#439) * fixed dataclass ordering and added metaclass for simplifying construction of dataclass terms * ensure term fields are not being overriden * added decorator and dataclass * updated to make defdata registration automatic * simplified dataclass loop * updated to give property op an appropriate name * added failing tests * fixed failing test * fixed numpyro/pyro/torch interfaces * minor fix + test for deffn kwargs --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> Co-authored-by: Kiran Gopinathan <23038502+kiranandcode@users.noreply.github.com>
eb8680
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Dec 22, 2025
* Release v0.2.3 (#374) * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * Try pulling in pyproject.toml from staging-llm to master (#425) * Generate instance-level `Operation`s for bound methods (#351) * generalize __get__ * nits * coverage of methoddescriptor api * methodtype * simplify * simplify * simplify * format * revert * restore * simplify * simplify * retain instance op on term construction * Simplify apply inheritance * assign * put call next to init_subclass * add explanatory comment * Operation.apply -> Operation.__apply__ * add test based on issue description * fix doctest * Fix dataclass @defops and added dataclass metaclass (#439) * fixed dataclass ordering and added metaclass for simplifying construction of dataclass terms * ensure term fields are not being overriden * added decorator and dataclass * updated to make defdata registration automatic * simplified dataclass loop * updated to give property op an appropriate name * added failing tests * fixed failing test * fixed numpyro/pyro/torch interfaces * minor fix + test for deffn kwargs * Type check and lint example code (#449) * format example code * type check examples * Add beam search example using thermometer continuations (#431) * add beam search example using thermometer continuations * address comments * add docstring * lint * Fix for jax 0.8.2 (#455) * fix for jax 0.8.2 * add more register * format --------- Co-authored-by: Jack Feser <jack.feser@gmail.com> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> Co-authored-by: Kiran Gopinathan <23038502+kiranandcode@users.noreply.github.com>
eb8680
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Dec 29, 2025
* Release v0.2.3 (#374) * stash * Install prettyprinter for term when library is available (#386) * install prettyprinter for term when library is available * lint * move code into types.py * fixes * fix pypandoc issue (#397) * Convert evaluate to a singledispatch (#398) * convert evaluate to a singledispatch * lint * add jnp.pi and ArrayTerm.T (#394) * Deprecate defterm (#399) * deprecate defterm * remove defterm case * remove defterm * lint * evaluate distribution arguments * lint * remove interpreter * Revert "remove interpreter" This reverts commit 3044277. * wip * lint * Rework numpyro distribution handling to enable symbolic distributions and handling of distribution methods (#311) * refactor distribution operations * add a test for typeof of distributions * add tests for symbolic dists/arguments * introduce operations for distribution methods * comment * fix tests * work around #310 * replace hack with new hack * tweak repr for _BaseOperation * lint * work around #312 * clean up access to dist ops * wip * wip * add type annotations to get correct term conversion * lint * include distribution arguments as properties * fix distribution calls * try again * fixes * format * Box the output of `__type_rule__` (#387) * box the output of __type_rule__ * fix tests * fix tests * require callers of __type_rule__ to box arguments * fix * move Box out of ops.types * lint * fix test * fix syntactic_eq implementation for jax arrays (#405) * Fix recursion error in sizesof (#406) * fix recursion error in sizesof * format * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * wip * Allow `_BaseOperation` subclasses to have an overrideable `apply` method (#414) * stash * fixes * initial * wip * lint * ensure each subclass has a fresh operation * wip * wip * lint * wip * wip * lint * refactor class method support * move defops * fix test * remove singledispatch case and add test * move definition * cleanup * simplify * cleanup * lint * fix failing test * fix classmethod * __isabstractmethod__ * revert --------- Co-authored-by: Eli <eli@basis.ai> * wip * fix define signature * wip * wip * wip * wip * wip * wip * wip * lint * wip * test fix * fix merge error * lint * wip * respond to feedback * respond to feedback * clean up notebook * remove breakpoint * relax typing requirement * improve handling of method templates * lint * remove imprecise check * handle nested classes using qualname * feedback * fix scoping issue and add tests * address feedback * add xfail tests * lint --------- Co-authored-by: Eli <eli@basis.ai> Co-authored-by: Tim Cooijmans <cooijmans.tim@gmail.com> Co-authored-by: eb8680 <eb8680@users.noreply.github.com>
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