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ENH: Add KDA runtime to KAPattern comparison#23

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nawtrey merged 4 commits intomasterfrom
update_kapattern_comparison
Jul 31, 2024
Merged

ENH: Add KDA runtime to KAPattern comparison#23
nawtrey merged 4 commits intomasterfrom
update_kapattern_comparison

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@nawtrey nawtrey commented Jul 22, 2024

  • Updates comparison.py to output the KDA expression generation time

  • Updates comparison_output.txt with updated run on Lorentz

  • Adds test_lambda_funcs.py which outputs
    timing statistics on KDA state probability
    expression evaluations using timeit

  • Adds test_lambda_funcs_output.txt which
    contains the terminal output for a run
    with 5 different kinetic diagrams from
    the KDA verification data

  • README updated to include description
    for test_lambda_funcs.py

* Updates `comparison.py` to output the KDA
expression generation time

* Updates `comparison_output.txt` with updated
run on Lorentz
@nawtrey nawtrey added the enhancement New feature or request label Jul 22, 2024
nawtrey added 2 commits July 25, 2024 15:08
* Add `test_lambda_funcs.py` which outputs
timing statistics on KDA state probability
expression evaluations using `timeit`

* Add `test_lambda_funcs_output.txt` which
contains the terminal output for a run
with 5 different kinetic diagrams from
the KDA verification data

* README updated to include description
for `test_lambda_funcs.py`
@nawtrey
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nawtrey commented Jul 30, 2024

Oops. It looks like pytest picked up the newly added file due to its name (i.e. test_). I'll change the file names and push an update.

@nawtrey nawtrey merged commit aa869dd into master Jul 31, 2024
@nawtrey nawtrey deleted the update_kapattern_comparison branch July 31, 2024 05:05
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