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Benedikt Kuhnhäuser edited this page Jan 13, 2026 · 25 revisions

Welcome to the GeneParliamentID wiki!

The wiki contains advice on the following topics:

  • Setup
    Instructions to set up everything for running the pipeline
  • Pipeline parameters
    Explanation of all pipeline inputs in detail.
  • Interpretation
    Guide through interpretation of the pipeline outputs
  • Method calibration
    Step-by-step instructions on selecting the optimal pipeline parameters for any lineage or set of genes
  • Tutorial
    Worked example of the GeneParliamentID pipeline using test data and calibration files

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