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Fix import issues (IAO/GO)#24

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XimeAixa merged 1 commit intomainfrom
fix/omo-ice-parent
Apr 21, 2026
Merged

Fix import issues (IAO/GO)#24
XimeAixa merged 1 commit intomainfrom
fix/omo-ice-parent

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@XimeAixa XimeAixa commented Apr 21, 2026

This PR addresses review points 1, 2 and 3 in OBOFoundry/OBOFoundry.github.io#2770 regarding improper import configuration and GO term usage.

Changes

Import strategy

  • Adopted the Base Module approach.
  • Replaced ro with ro-base to avoid unintended annotation leakage.
  • Added go-base for improved hierarchy and label consistency.
  • Added explicit IAO import.
  • New imported terms:
    GO: GO:0003674, GO:0016301, GO:0003824, GO:0016740, GO:0016772
    IAO: IAO:0000030
  • Updated repository to ODK v1.6.1.

Fixes

1. Fix BFO hierarchy for IAO terms
Ensured that information content entity (IAO:0000030) is correctly placed within the BFO hierarchy.
2. GO label correction
Restored the original label for:
GO:0003674 → molecular_function
3. GO hierarchy improvement
Ensured inclusion of intermediate terms between kinase activity (GO:0016301) and molecular_function (GO:0003674)

replace RO import with ro-base
add GO import with go-base
add IAO import
updates repo to odk v1.6.1
@XimeAixa XimeAixa merged commit 4da1b5a into main Apr 21, 2026
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2 participants