Open
Conversation
Add manifests/ directory with canonical capability manifests for Neuroglancer, Avivator, OME-Zarr Validator, and Vol-E. These can be loaded by URL so non-Fileglancer consumers can access them. Also fix neuroglancer omero_metadata to true in public/viewers/.
Expand README with: - Canonical manifests table linking to manifests/ directory - Full viewer section schema (name, version, repo, template_url) - Full capabilities section schema with all fields documented - Table showing how validateViewer() maps each capability check to errors vs warnings
Replaces `compatible: boolean` on `ValidationResult` with two separate fields: `dataCompatible` (hard gate — viewer is shown or hidden) and `dataFeaturesSupported` (soft gate — warnings are shown). Reclassifies `channels`, `timepoints`, and `hcs_plates` from hard errors to soft warnings, since viewers that don't support these features can still open the data. Fixes `getCompatibleViewersWithDetails()` to call `validateViewer()` once per manifest instead of twice. Fixes version comparison to use string equality via `.map(String)` instead of `parseFloat`, avoiding future breakage with versions like "0.10".
Adds CoordinateTransformation and DatasetMetadata types modelling the OME-NGFF coordinateTransformations spec (identity, scale, and translation each supporting inline list or path reference). Adds a hasTransformationType() helper and soft-requirement warning checks for scale, translation, and bioformats2raw_layout. Adds a tracked TODO for rfcs_supported explaining the spec-level gap that blocks implementation.
Documents the dataCompatible/dataFeaturesSupported distinction, updates the checks table with a Level column showing which capabilities are hard compatibility requirements vs soft feature support, adds rows for scale/translation/bioformats2raw_layout, and notes the rfcs_supported spec-level gap.
Zarr v2 stores compression info as `compressor: { id: string }` in array
metadata; Zarr v3 uses `codecs: [{ name: string }]`. The previous check
only handled v2 and had a broken fallback (`|| metadata.compressor`) for
the case where `.id` was absent. Replaces the single-codec check with a
collection step that reads from whichever field is present, then checks
each codec individually — emitting one error per unsupported codec and a
single warning when the viewer declares no codec support at all.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This PR adds the viewer manifests and logos to the capability-manifest repo. Previously, they were hosted in fileglancer. The README is updated to reflect this change.
This is related to PR #307 in Fileglancer.
Note: before merging this PR, the URL for the logo location will need to be updated to point to this repo's
mainbranch instead of thehost-manifests-and-docsbranch. This should also be accompanied by a new patch release and a corresponding version update for this package in the fileglancerpackage.json.@krokicki