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reworked get_interaction_matrix and get_interaction_pvals to be faster with numba#345

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newmana merged 4 commits into
BiomedicalMachineLearning:masterfrom
lhock17:speed_up
Apr 16, 2026
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reworked get_interaction_matrix and get_interaction_pvals to be faster with numba#345
newmana merged 4 commits into
BiomedicalMachineLearning:masterfrom
lhock17:speed_up

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@lhock17 lhock17 commented Apr 16, 2026

The original implementation forced numba into object mode to deduplicate string arrays. This now uses only integer-based numba traversal that speeds things up by at least 10 times.

@newmana newmana merged commit 7677064 into BiomedicalMachineLearning:master Apr 16, 2026
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