ARKS v1.0.4

Big fixes
Improved documentation
Better input error handling

ARKS v1.0.3

• Release version 1.0.3
• Consider barcode sequence to be all non-white space characters after the "BX:Z" tag
• Added arks-make Makefile for running ARKS pipeline
• Add ARKS test demo
• Correct default parameter value (-e)
• makeTSVfile.py uses distance estimations for dist_category in TSV checkpoint file for LINKS
• Change default gap size to 100bp (in makeTSVfile.py)

ARKS v1.0.2

• Make makeTSVfile.py use distance estimates when available (LINKS integration)
• Fix out-of-range crashes on contigs / contig pairs without barcode mappings
• Clean up Graphviz output

ARKS v1.0.1

Rename ARCS => ARKS (binary and source files)

ARKS v1.0.0

Initial release of ARKS, an alignment-free version of ARCS.