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This repository was archived by the owner on Jun 18, 2026. It is now read-only.

4. Projects

hsienchao edited this page Apr 4, 2022 · 13 revisions

A project includes a set of patients or cell line experiments. The project views provide the statistics for the whole cohort and help users identify important events with integrated user interface.

Summary

The summary tab shows the meta data statistics. Oncogenomics automatically determines if the data types is categorical or numeric and shows bar chart or pie chart respectively. If the project has diagnoses >= 10, a sortable table will be displayed.

Users can move the mouse over the bar/pie area to see the detailed patient count. By clicking them, a patient table will show up. Users can view the patient pages by selecting the links.

Patients

A patient table including all the meta data.

Mutations

TIL

Gene fusions

Expression

CNV

Survival analysis

QC

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