Look into generalizing BED and GFF coordinate objects into the same class (differentiating with readGFF/readBED and writeGFF/writeBED methods). Otherwise perhaps have them inherit functions from a parent Coordinate object class. This will facilitate the addition of other features relating to user-selected format type options for input/outputs.
Look into generalizing BED and GFF coordinate objects into the same class (differentiating with readGFF/readBED and writeGFF/writeBED methods). Otherwise perhaps have them inherit functions from a parent Coordinate object class. This will facilitate the addition of other features relating to user-selected format type options for input/outputs.