bugfix batch PEStat in GUI interface#67
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WilliamKMLai merged 1 commit intomasterfrom Jun 17, 2021
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This update fixes the GUI PEStat bugs that cause the PEStat tool to quit execution after the first BAM file has its stats calculated. It also fixes the GUI so that BAM files without BAI do not interrupt execution of a set of BAMs. window_interface/PEStatWindow -fix default and base output directory information window_interface/PEStatOutput -fix default output filename -rename output variables to be more specific (output directory vs output file basename) -perform check so that close attempts are not made for null PrintStream objects scripts/PEStats -moved or stripped some unnecessary print statements -display null charts when BAI does not exist (prevents thrown Exceptions that terminate execution of the whole set of BAM files prematurely) -removed the redundant PrintStream close statements (remaining close statements in PEStatOutput class)
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This update fixes the GUI PEStat bugs that cause the PEStat tool to quit execution after the first BAM file has its stats calculated. It also fixes the GUI so that BAM files without BAI do not interrupt execution of a set of BAMs.