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QC article DOI fixed. #57

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May 2, 2025
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QC article DOI fixed. #57

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -96,7 +96,7 @@ python3 -m unittest

### Running QC and post-processing

Quality control (QC) may be run using the criteria outlined in [Rapid Characterization of hERG Channel Kinetics I](https://doi.org/10.1016/j.bpj.2019.07.030) and [Evaluating the predictive accuracy of ion channel models using data from multiple experimental designs](https://doi.org/10.1101/2024.08.16.608289). These criteria assume the use of the `staircase` protocol for quality control, which should be the first and last protocol performed. We also assume the presence of repeats after the addition of an IKr blocker (such as dofetilide).
Quality control (QC) may be run using the criteria outlined in [Rapid Characterization of hERG Channel Kinetics I](https://doi.org/10.1016/j.bpj.2019.07.029) and [Evaluating the predictive accuracy of ion channel models using data from multiple experimental designs](https://doi.org/10.1101/2024.08.16.608289). These criteria assume the use of the `staircase` protocol for quality control, which should be the first and last protocol performed. We also assume the presence of repeats after the addition of an IKr blocker (such as dofetilide).

Prior to performing QC and exporting, an `export_config.py` file should be added to the root of the data directory. This file (see `example_config.py`) contains a Python `dict` (`Q2S_DC`) specifying the filenames of the protocols used for QC, and names they should be outputted with, as well as a Python `dict` (`D2S`) listing the other protocols and names to be used for their output. Additionally, the `saveID` field specifies the name of the expeirment which appears in the output file names.

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