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Merged
MichaelClerx merged 4 commits into from
Oct 26, 2025
Merged

Update setup.py #83

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ec5548c
Update setup.py
MichaelClerx Oct 17, 2025
82ba3c5
Merge branch 'main' into update-setup
MichaelClerx Oct 17, 2025
d8f4179
Reinstated openpyxl dependency
MichaelClerx Oct 17, 2025
da0ae7b
Reinstated jinja dependency
MichaelClerx Oct 17, 2025
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24 changes: 11 additions & 13 deletions setup.py
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Original file line number Diff line number Diff line change
Expand Up @@ -13,18 +13,18 @@
# Module name (lowercase)
name='pcpostprocess',
version='0.0.1',
description='Export high-throughput patch-clamp data from the Nanion SyncroPatch',
description='Post-process patch clamp recordings with the staircase protocol',
long_description=readme,
long_description_content_type="text/markdown",
author='Frankie Patten-Elliot, Joseph Shuttleworth, Chon Lok Lei',
author='Frankie Patten-Elliot, Joseph Shuttleworth, Chon Lok Lei, Michael Clerx',
author_email='joseph.shuttleworth@nottingham.ac.uk',
maintainer='Joseph Shuttleworth',
maintainer_email='joseph.shuttleworth@nottingham.ac.uk',
# url='https://github.com/CardiacModelling/markov-builder',
url='https://github.com/CardiacModelling/pcpostprocess',
classifiers=[
"Programming Language :: Python :: 3",
"License :: OSI Approved :: BSD License",
"Operating System :: OS Independent",
'Programming Language :: Python :: 3',
'License :: OSI Approved :: BSD License',
'Operating System :: OS Independent',
],

# Packages to include
Expand All @@ -35,7 +35,7 @@
include_package_data=True,

# Required Python version
python_requires='>=3.7',
python_requires='>=3.10',

# List of dependencies
install_requires=[
Expand All @@ -44,25 +44,23 @@
'matplotlib>=3.4',
'pandas>=1.3',
'regex>=2023.12.25',
'openpyxl>=3.1.2',
'jinja2>=3.1.0',
'seaborn>=0.12.2'
'seaborn>=0.12.2',
'openpyxl>=3.1.2', # Used via pandas (to create excel doc)
'jinja2>=3.1.0', # Used via pandas (to create latex doc)
],
extras_require={
'test': [
'pytest-cov>=2.10', # For coverage checking
'pytest>=4.6', # For unit tests
'flake8>=3', # For code style checking
'isort',
'mock>=3.0.5', # For mocking command line args etc.
'codecov>=2.1.3',
'syncropatch_export @ git+https://github.com/CardiacModelling/syncropatch_export.git'
],
},
entry_points={
'console_scripts': [
'pcpostprocess='
'pcpostprocess.scripts.__main__:main',
'pcpostprocess=pcpostprocess.scripts.__main__:main',
],
},
)