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@ChapuyLab

ChapuyLab

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  1. somatic_variant_caller somatic_variant_caller Public

    A snakemake pipeline which incorporates somatic variant calling using the GATK best practices

    Python

  2. AlignmentPipeline AlignmentPipeline Public

    A snakemake based alignment pipeline for aligning WGS/WES/Panel paired end reads

    Python

  3. CNVCaller CNVCaller Public

    Calling CNV for

  4. GeneticClassificationInputCreator GeneticClassificationInputCreator Public

  5. TumorOnlyFilter TumorOnlyFilter Public

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