Skip to content

microeco v0.7.0

Choose a tag to compare

@ChiLiubio ChiLiubio released this 19 Mar 03:04
· 868 commits to master since this release
  1. add trans_classifier class
  2. add CCA method in trans_env class and rename functions associated with ordination.
  3. optimize scaled-up methods and parameters in trans_ordination of trans_env class.
  4. optimize the format of returned pathway files of cal_tax4fun2 in trans_func class.
  5. optimize classes to accept null microtable object when created for external data analysis.
  6. optimize text size adjustment parameters in plot_lefse_cladogram of trans_diff class
  7. add taxa abundance filtering in trans_diff and trans_classifier object creating
  8. add KW_dunn for Dunn's Kruskal-Wallis Multiple Comparisons in trans_alpha$cal_diff and trans_diff$new.
  9. optimize KW method in trans_alpha$cal_diff and trans_diff$new.
  10. add dendrogram option for clustering based on ggplot2 in plot_cor of trans_env class.
  11. add colors instance
  12. change use_OTUs_frequency to use_frequency in trans_venn_com function of trans_venn class.
  13. fix the bug in trans_func$cal_tax4fun2_FRI()
  14. fix the warnings in plot_lefse_cladogram of trans_diff class