CSV to json converter, validate and dry-run proxy endpoints

[1.0]

Added

• Poetry install
• main.py file with first functions
• .gitignore and CHANGELOG files
• json submission_schema and demo submission object
• tests folder
• Basic howto on README.md
• submission_from_csv endpoint and function to read csv files
• Add custom logging formatting
• Tests and coverage GitHub workflow
• Proxy endpoint to interrogate the submission dry run endpoint of ClinVar API
• Proxy endpoint to interrogate the submission validate endpoint of ClinVar API
• Dockerfile
• Docker-compose file
• GitHub actions to build Docker images (prod and stage) and push them to Docker Hub
• Codecov coverage badge
• Version number in CHANGELOG file and heartbeat endpoint

Changed

• Updated submission schema in resources following new release of schema by ClinVar (draft-07)
• Improved README files with description of endpoints and how to test it
• Increased test coverage
• Pass ClinVar API KEY as a form field and not a query argument

Fixed

• Parsing of CaseData csv with more than one individuals associated to the same variant
• dry-run enpoint, to return success when ClinVar returns a 204 successful response
• Dockerfile returning __call__() missing 1 required positional argument: 'send' error