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Release 4.15

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@dnil dnil released this 03 Apr 14:26
4.15
badd6f3
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Learn about vigilant mode.

Release 4.15

Added

  • Clinvar CNVs IGV track
  • Gene panels can have maintainers
  • Keep variant actions (dismissed, manual rank, mosaic, acmg, comments) upon variant re-upload
  • Keep variant actions also on full case re-upload

Fixed

  • Fix the link to Ensembl for SV variants when genome build 38.
  • Arrange information in columns on variant page
  • Fix so that new cosmic identifier (COSV) is also acceptable #1304
  • Fixed COSMIC tag in INFO (outside of CSQ) to be parses as well with & splitter.
  • COSMIC stub URL changed to https://cancer.sanger.ac.uk/cosmic/search?q= instead.
  • Updated to a version of IGV where bigBed tracks are visualized correctly
  • Clinvar submission files are named according to the content (variant_data and case_data)
  • Always show causatives from other cases in case overview
  • Correct disease associations for gene symbol aliases that exist as separate genes
  • Re-add "custom annotations" for SV variants
  • The override ClinVar P/LP add-in in the Clinical Filter failed for new CSQ strings

Changed

  • Runs all CI checks in github actions
Assets 2
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