Institute-level loqusdb settings and a broader gene panel choice in variants filtering

[4.21]

Added

• Support to configure LoqusDB per institute
• Highlight causative variants in the variants list
• Add tests. Mostly regarding building internal datatypes.
• Remove leading and trailing whitespaces from panel_name and display_name when panel is created
• Mark MANE transcript in list of transcripts in "Transcript overview" on variant page
• Show default panel name in case sidebar
• Previous buttons for variants pagination
• Adds a gh action that checks that the changelog is updated
• Adds a gh action that deploys new releases automatically to pypi
• Warn users if case default panels are outdated
• Define institute-specific gene panels for filtering in institute settings
• Use institute-specific gene panels in variants filtering
• Show somatic VAF for pinned and causative variants on case page

Fixed

• Report pages redirect to login instead of crashing when session expires
• Variants filter loading in cancer variants page
• User, Causative and Cases tables not scaling to full page
• Improved docs for an initial production setup
• Compatibility with latest version of Black
• Fixed tests for Click>7
• Clinical filter required an extra click to Filter to return variants
• Restore pagination and shrink badges in the variants page tables
• Removing a user from the command line now inactivates the case only if user is last assignee and case is active
• Bugfix, LoqusDB per institute feature crashed when institute id was empty string
• Bugfix, LoqusDB calls where missing case count
• filter removal and upload for filters deleted from another page/other user
• Visualize outdated gene panels info in a popover instead of a tooltip in case page side panel