Skip to content

New documentation links and continuous maintenance

Choose a tag to compare

View all tags
@northwestwitch northwestwitch released this 25 Mar 14:24
v4.31
199d5f0
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Verified
Learn about vigilant mode.

[4.31]

Added

  • gnomAD annotation field in admin guide
  • Export also dynamic panel genes not associated to an HPO term when downloading the HPO panel
  • Primary HGNC transcript info in variant export files
  • Show variant quality (QUAL field from vcf) in the variant summary
  • Load/update PDF gene fusion reports (clinical and research) generated with Arriba
  • Support new MANE annotations from VEP (both MANE Select and MANE Plus Clinical)
  • Display on case activity the event of a user resetting all dismissed variants
  • Support gnomAD population frequencies for mitochondrial variants
  • Anchor links in Casedata ClinVar panels to redirect after renaming individuals

Fixed

  • Replace old docs link www.clinicalgenomics.se/scout with new https://clinical-genomics.github.io/scout
  • Page formatting issues whenever case and variant comments contain extremely long strings with no spaces
  • Chromograph images can be one column and have scrollbar. Removed legacy code.
  • Column labels for ClinVar case submission
  • Page crashing looking for LoqusDB observation when variant doesn't exist
  • Missing inheritance models and custom inheritance models on newly created gene panels
  • Accept only numbers in managed variants filter as position and end coordinates
  • SNP id format and links in Variant page, ClinVar submission form and general report
  • Case groups tooltip triggered only when mouse is on the panel header

Changed

  • A more compact case groups panel
  • Added landscape orientation CSS style to cancer coverage and QC demo report
  • Improve user documentation to create and save new gene panels
  • Removed option to use space as separator when uploading gene panels
  • Separating the columns of standard and custom inheritance models in gene panels
  • Improved ClinVar instructions for users using non-English Excel
Assets 2
Loading