METPO predicate proposal cohort metpo_traitmech_v2 (8 predicates, local-only) by realmarcin · Pull Request #65 · CultureBotAI/TraitMech

realmarcin · 2026-05-23T21:32:28Z

Summary

Scope-B follow-on to the v1 cohort (#63). Proposes 8 new METPO object properties (METPO:2007400–METPO:2007407) that together cover 128 of the 537 residual causal-edge predicates left after the v1 grounding pass (#61), plus 2 RO mapping clarifications.

Not filed upstream in this PR — cohort lives in this repo only, matching the pattern established for v1 (#63).

Cohort (`proposals/metpo_traitmech_v2/`)

METPO ID	Label	Edges	Cluster
`METPO:2007400`	manifests as	52	Phenotype manifestation: physiological state → observable trait
`METPO:2007401`	selects for	20	Evolutionary selection: env condition → adapted trait
`METPO:2007402`	feeds electrons into	12	Electron flux: donor → respiratory / transport pathway
`METPO:2007403`	transfers electrons to	6	Single-step redox: donor → acceptor
`METPO:2007404`	fixed by	9	Inorganic substrate → fixation pathway
`METPO:2007405`	oxidized to	8	Reduced substrate → oxidized product
`METPO:2007406`	challenges	9	Stressor → tolerance trait (paired)
`METPO:2007407`	mitigates	12	Defense → stressor (paired-positive of challenges)

Each candidate was checked against RO/Biolink first; per-predicate rejections documented in proposal.md (e.g. biolink:manifestation_of has range disease, too narrow; biolink:treats is clinical; etc.).

Subset tag: metpo_traitmech_2026_06. Domain = range = METPO:1007401 (trait causal node, minted in v1).

Mapping expansion (this PR)

mappings/predicate_grounding.tsv grows from 28 → 38 rows:

8 new METPO predicates above
controls → RO:0002211 (semantic equivalent of regulates per RO definition)
directs → RO:0002211 (same)

Corpus impact

After applying just ground-predicates --apply:

	Before v2	After v2
Edges grounded	482	618 (+136)
Edges residual	537	401 (−136)
Distinct residual labels	191	181 (−10)

The remaining 401-edge residual is dominated by curator-paraphrased predicates with low counts (drives 19, defines 14, maintains 13; then 178 labels with ≤12 edges each). A future v3 cohort could pick up another cluster after v2 adoption.

Verification (local)

$ just verify-proposal metpo_traitmech_v2
  properties TSV: 10 rows
  failures: 0
  status:   PASS

$ just robot-validate-proposal metpo_traitmech_v2
  merged.owl lines:    8454
  reasoned.owl lines:  8460
  delta:               +6
  status:              PASS (no UNSAT, ELK exited 0)

$ just validate-strict
  files scanned:      357
  files with ERROR:   0

ELK reasoning sees METPO:1007401 (v1 domain class) as an unnamed external IRI — no error, just preserved domain/range constraint that resolves cleanly once v1 + v2 are merged upstream together.

Test plan

just verify-proposal metpo_traitmech_v2 → PASS
just robot-validate-proposal metpo_traitmech_v2 → PASS
just validate-strict clean (357 files, 0 ERRORs) after re-grounding
Idempotency: re-running just ground-predicates --apply reports 0 additional groundings
CI re-runs validate-strict on the YAML diff

🤖 Generated with Claude Code

Scope-B proposal: 8 new METPO object properties (METPO:2007400-METPO:2007407) covering 128 of the 537 residual causal-edge predicates left by the v1 grounding pass (#61). Cohort (proposals/metpo_traitmech_v2/): - manifests as (METPO:2007400, 52 edges) — state → observable trait - selects for (METPO:2007401, 20 edges) — env condition → adapted trait - feeds electrons into (METPO:2007402, 12 edges) — donor → transport chain - transfers electrons to (METPO:2007403, 6 edges) — single-step redox - fixed by (METPO:2007404, 9 edges) — substrate → fixation pathway - oxidized to (METPO:2007405, 8 edges) — substrate → oxidized product - challenges (METPO:2007406, 9 edges) — stressor → tolerance trait - mitigates (METPO:2007407, 12 edges) — defense → stressor (paired) Each candidate was checked against RO/Biolink first; rejections documented per-row in proposal.md (e.g. biolink:manifestation_of has range `disease` — too narrow; biolink:treats is clinical; etc.). Subset tag: metpo_traitmech_2026_06. Domain = range = METPO:1007401 (trait causal node, minted in v1). ROBOT/ELK validates clean: delta +6 axioms, no UNSAT (v1's METPO:1007401 resolves to unnamed external IRI without v1 merged, which is fine — no error, just preserved domain/range constraint). Per-corpus impact (after re-running ground-predicates --apply with the expanded 38-row mappings TSV): - Edges grounded: 482 → 618 (+136) - Edges residual: 537 → 401 (−136) - Distinct labels: 191 → 181 (−10) Also adds 2 RO mappings (controls, directs → RO:0002211 regulates) that match the RO definition of regulation but were not in the v1 mapping cohort. NOT filed upstream in this PR (per user instruction). Cohort lives in this repo only; upstream filing path documented in proposal.md. Mapping TSV notes flag the 8 proposed CURIEs as "proposed upstream in proposals/metpo_traitmech_v2" so reviewers know they're pending METPO adoption. Verified locally: - just verify-proposal metpo_traitmech_v2 → PASS (0 failures) - just robot-validate-proposal metpo_traitmech_v2 → PASS (ELK +6) - just validate-strict → 0 ERROR rows / 357 files Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Copilot

Pull request overview

Adds a second local-only METPO proposal cohort (metpo_traitmech_v2) to cover high-frequency residual causal-edge predicates and applies the expanded predicate-grounding mappings across the TraitMech corpus, updating grounding/residual reports accordingly.

Changes:

Introduces 8 proposed METPO ObjectProperties (METPO:2007400–METPO:2007407) as a v2 proposal cohort with ROBOT-template TSV + narrative.
Expands mappings/predicate_grounding.tsv with 10 new mappings (8 proposed METPO predicates + controls/directs → RO:0002211).
Re-runs predicate grounding across affected trait YAMLs and refreshes residual + Biolink coverage reports.

Reviewed changes

Copilot reviewed 115 out of 115 changed files in this pull request and generated 4 comments.

Show a summary per file

File	Description
reports/predicate_grounding_residual.tsv	Updated residual predicate list after applying the expanded grounding mapping.
reports/biolink_coverage.tsv	Updated applied/residual coverage snapshot reflecting new mappings.
proposals/metpo_traitmech_v2/proposal.md	New v2 cohort narrative describing scope, rationale, verification, and corpus impact.
proposals/metpo_traitmech_v2/metpo_proposal_properties_robot.tsv	New ROBOT template TSV defining the 8 proposed METPO predicates.
mappings/predicate_grounding.tsv	Adds mappings for the 8 proposed predicates plus `controls`/`directs` → `RO:0002211`.
data/traits/physiology/photolithotrophic.yaml	Grounds an edge predicate_id to `METPO:2007402` and appends curation history event.
data/traits/physiology/photolithoautotrophic.yaml	Grounds an edge predicate_id to `METPO:2007404` and appends curation history event.
data/traits/physiology/photoautotrophic.yaml	Grounds multiple edge predicate_ids to new v2 METPO predicate CURIEs and appends curation history event.
data/traits/physiology/organotrophic.yaml	Grounds an edge predicate_id to `METPO:2007402` and appends curation history event.
data/traits/physiology/organoheterotrophic.yaml	Grounds an edge predicate_id to `METPO:2007402` and appends curation history event.
data/traits/physiology/oligotrophic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/physiology/nutrient_adaptation.yaml	Grounds `controls` edge to `RO:0002211` and `manifests as` edges to `METPO:2007400`; appends curation history event.
data/traits/physiology/mixotrophic.yaml	Grounds an edge predicate_id to `METPO:2007404` and appends curation history event.
data/traits/physiology/methylotrophic.yaml	Grounds an edge predicate_id to `METPO:2007405` and appends curation history event.
data/traits/physiology/methanotrophic.yaml	Grounds an edge predicate_id to `METPO:2007405` and appends curation history event.
data/traits/physiology/lithoheterotrophic.yaml	Grounds edges to `METPO:2007402`/`METPO:2007403` and appends curation history event.
data/traits/physiology/lithoautotrophic.yaml	Grounds an edge predicate_id to `METPO:2007404` and appends curation history event.
data/traits/physiology/hydrogenotrophic.yaml	Grounds edges to `METPO:2007405`/`METPO:2007404` and appends curation history event.
data/traits/physiology/copiotrophic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/physiology/chemotrophic.yaml	Grounds edges to `METPO:2007402`/`METPO:2007403` and appends curation history event.
data/traits/physiology/chemoorganotrophic.yaml	Grounds edges to `METPO:2007402`/`METPO:2007403` and appends curation history event.
data/traits/physiology/chemolithotrophic.yaml	Grounds edges to `METPO:2007405`/`METPO:2007402` and appends curation history event.
data/traits/physiology/chemolithoheterotrophic.yaml	Grounds an edge predicate_id to `METPO:2007402` and appends curation history event.
data/traits/physiology/chemolithoautotrophic.yaml	Grounds edges to `METPO:2007402`/`METPO:2007404` and appends curation history event.
data/traits/physiology/chemoautotrophic.yaml	Grounds an edge predicate_id to `METPO:2007404` and appends curation history event.
data/traits/physiology/chemoautolithotrophic.yaml	Grounds edges to `METPO:2007402`/`METPO:2007404` and appends curation history event.
data/traits/physiology/carboxydotrophic.yaml	Grounds edges to `METPO:2007405`/`METPO:2007402` and appends curation history event.
data/traits/physiology/autotrophic.yaml	Grounds an edge predicate_id to `METPO:2007404` and appends curation history event.
data/traits/morphology/yellow_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/white_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/triangular_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/tailed_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/star_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/square_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/sporulation.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/spore_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/spore_forming.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/spindle_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/rod_shaped.yaml	Grounds a `directs/controls`-style edge to `RO:0002211` and appends curation history event.
data/traits/morphology/ring_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/red_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/pleomorphic_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/pink_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/pigmentation.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/ovoid_shaped.yaml	Grounds edges to `RO:0002211` and `METPO:2007400` and appends curation history event.
data/traits/morphology/oval_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/morphology/orange_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/non_spore_forming.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/morphology/non_motile.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/morphology/motile.yaml	Grounds an edge predicate_id to `RO:0002211` and appends curation history event.
data/traits/morphology/irregular_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/green_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/gram_variable.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/fusiform_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/flask_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/morphology/filament_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/ellipsoidal.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/dumbbell_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/disc_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/diplococcus_shaped.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/morphology/cream_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/coccobacillus_shaped.yaml	Grounds a `controls` edge to `RO:0002211` and appends curation history event.
data/traits/morphology/carotenoid_pigmentation.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/brown_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/branched_shaped.yaml	Grounds `controls`/`directs` edges to `RO:0002211` and `manifests as` to `METPO:2007400`; normalizes wrapped text; appends curation history event.
data/traits/morphology/black_pigmented.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/morphology/bacillus_shaped.yaml	Grounds a `directs/controls`-style edge to `RO:0002211` and appends curation history event.
data/traits/metabolism/respiration.yaml	Grounds an edge predicate_id to `METPO:2007403` and appends curation history event.
data/traits/metabolism/electron_transfer.yaml	Grounds an edge predicate_id to `METPO:2007403` and appends curation history event.
data/traits/metabolism/disproportionation.yaml	Grounds an edge predicate_id to `METPO:2007405` and appends curation history event.
data/traits/metabolism/cable_bacteria_metabolism.yaml	Grounds an edge predicate_id to `METPO:2007403` and appends curation history event.
data/traits/environment/thermophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/temperature_range.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/environment/temperature_preference.yaml	Grounds a `challenges` edge to `METPO:2007406` and appends curation history event.
data/traits/environment/temperature_optimum.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/temperature_optimum_very_low.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/temperature_optimum_high.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/temperature_delta.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/slightly_halophilic.yaml	Grounds a `mitigates` edge to `METPO:2007407` and appends curation history event.
data/traits/environment/psychrotolerant.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/psychrophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/ph_range.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/environment/ph_optimum.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/ph_optimum_low.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/ph_optimum_high.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/ph_growth_preference.yaml	Grounds `challenges` edges to `METPO:2007406` and appends curation history event.
data/traits/environment/ph_delta.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/obligately_alkaphilic.yaml	Grounds a `challenges` edge to `METPO:2007406` and appends curation history event.
data/traits/environment/obligately_acidophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/non_halophilic.yaml	Grounds `mitigates` edges to `METPO:2007407`, normalizes wrapped text, and appends curation history event.
data/traits/environment/nacl_range.yaml	Grounds an edge predicate_id to `METPO:2007400`, normalizes wrapped text, and appends curation history event.
data/traits/environment/nacl_optimum.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/nacl_optimum_high.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/nacl_delta.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/environment/moderately_halophilic.yaml	Grounds edges to `METPO:2007407`/`METPO:2007401` and appends curation history event.
data/traits/environment/microaerotolerant.yaml	Grounds a `mitigates` edge to `METPO:2007407`, normalizes wrapped text, and appends curation history event.
data/traits/environment/mesophilic.yaml	Grounds edges to `METPO:2007401`/`METPO:2007400` and appends curation history event.
data/traits/environment/hyperthermophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/halotolerant.yaml	Grounds a `mitigates` edge to `METPO:2007407` and appends curation history event.
data/traits/environment/halophily_preference.yaml	Grounds a `mitigates` edge to `METPO:2007407` and appends curation history event.
data/traits/environment/halophilic.yaml	Grounds edges to `METPO:2007401`/`METPO:2007407` and appends curation history event.
data/traits/environment/facultatively_alkaphilic.yaml	Grounds a `challenges` edge to `METPO:2007406` and appends curation history event.
data/traits/environment/facultatively_acidophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/extremely_halophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/extreme_hyperthermophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/environment/euryhaline.yaml	Grounds edges to `METPO:2007401`/`METPO:2007407` and appends curation history event.
data/traits/environment/alkaphilic.yaml	Grounds edges to `METPO:2007401`/`METPO:2007406` and appends curation history event.
data/traits/environment/alkalotolerant.yaml	Grounds `challenges` edges to `METPO:2007406` and appends curation history event.
data/traits/environment/aerotolerant.yaml	Grounds a `mitigates` edge to `METPO:2007407` and appends curation history event.
data/traits/environment/acidotolerant.yaml	Grounds a `challenges` edge to `METPO:2007406` and appends curation history event.
data/traits/environment/acidophilic.yaml	Grounds an edge predicate_id to `METPO:2007401` and appends curation history event.
data/traits/ecology/plant_pathogen.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/ecology/pathogenic_to_host.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/ecology/human_pathogen.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.
data/traits/ecology/animal_pathogen.yaml	Grounds an edge predicate_id to `METPO:2007400` and appends curation history event.

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Three fixes per Copilot inline comments: - TSV row 3 (manifests as): swap definition_source from `copiotrophic.yaml` (which has no `manifests as` edge — only `selects for`, `supports`, etc.) to `nutrient_adaptation.yaml#nutrient_adaptation_life_history_axis`, which is the canonical graph where `manifests as` first appears. - TSV row 9 (challenges): swap definition_source from `acidophilic.yaml` (no `challenges` edge — uses `selects for`) to `acidotolerant.yaml#acidotolerant_acid_stress_homeostasis`, which carries the `acidic_exposure challenges ...` edge directly. - proposal.md context paragraph: correct grounded counts from the incorrect "648 of 1185" to the actual "618 of 1019", matching the Corpus Impact table. Verified via `uv run python <<<` count over data/traits/**/causal_graphs[].edges[] (total=1019, grounded=618, residual=401). - proposal.md paired-predicate heading: rephrase "the only paired pair" → "the only paired predicate set" (removes the redundancy). Verified: `just verify-proposal metpo_traitmech_v2` → PASS, 0 failures. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

…cate, 14 edges) (#73) * Add METPO predicate proposal cohort metpo_traitmech_v4 (defines) Follow-on to v2 predicate cohort (#65). Picks up the next-most- prevalent single residual label: `defines` (14 edges in delta/range/optimum phenotype graphs). Cohort (proposals/metpo_traitmech_v4/, 1 predicate row): - METPO:2007500 defines (14 edges) "<axis> defines <phenotype>" — operationally-definitional relation between an environmental measurement axis and the phenotype variable it parameterizes. Each rejected upstream candidate documented in proposal.md (biolink:has_phenotype wrong direction; RO:0000087 mismatched semantics; METPO:2007401 selects-for is evolutionary not definitional). ID block: METPO:2007500 (fresh 2007500+ block per skill; v2 used 2007400-2007407). Subset tag: metpo_traitmech_2026_08. Domain = range = METPO:1007401 (trait causal node, v1). Mapping addition (mappings/predicate_grounding.tsv, 38 → 39 rows): - defines → METPO:2007500 Per-corpus impact: Edges grounded: 688 → 702 (+14, 67% → 69%) Edges residual: 331 → 317 (-14) Distinct labels: 177 → 176 (-1) NOT filed upstream (per established v1+v2+v3 convention). Verified locally: - just verify-proposal metpo_traitmech_v4 → PASS (0 failures) - just robot-validate-proposal metpo_traitmech_v4 → PASS, ELK +6 - just validate-strict → 0 ERROR rows / 357 files - just ground-predicates (post-apply) → 0 additional groundings (idempotent) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * Address Copilot review on PR #73 Broaden the `defines` predicate definition + narrative to cover both edge clusters in the corpus: - 12 environmental-axis → numerical-phenotype edges (delta / range / optimum graphs across pH, salinity, NaCl, oxygen, temperature) — the dominant pattern. - 2 structural-feature → morphology-trait edges (`outer membrane defines gram negative`, `periplasmic flagella defines axially filamented`) — same operational-definition semantics with a structural rather than environmental subject. Updates in this commit: - proposal.md context paragraph + "uses cluster" paragraph split into the two-cluster description. - metpo_proposal_properties_robot.tsv METPO:2007500 definition broadened from "environmental measurement axis" to "operationally-defining feature (environmental measurement axis/condition, or structural/anatomical feature)" with both cluster examples in the definition. - mappings/predicate_grounding.tsv notes column updated to document both cluster groups. Originally I narrowed the proposal definition to the dominant 12-edge cluster and missed the 2-edge morphology cluster — but both were getting grounded to METPO:2007500. The fix preserves the same grounding (all 14 edges → METPO:2007500) while making the formal definition match what's actually grounded. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Copilot AI review requested due to automatic review settings May 23, 2026 21:32

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realmarcin merged commit bdc6051 into main May 24, 2026
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realmarcin deleted the metpo-proposal-traitmech-v2 branch May 24, 2026 03:58

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METPO predicate proposal cohort metpo_traitmech_v2 (8 predicates, local-only)#65

METPO predicate proposal cohort metpo_traitmech_v2 (8 predicates, local-only)#65
realmarcin merged 2 commits into
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metpo-proposal-traitmech-v2

realmarcin commented May 23, 2026

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realmarcin commented May 23, 2026

Summary

Cohort (proposals/metpo_traitmech_v2/)

Mapping expansion (this PR)

Corpus impact

Verification (local)

Test plan

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Cohort (`proposals/metpo_traitmech_v2/`)