Update master from develop #445
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* #376: rework import structure and improve code quality #376: include python3.9 setup and add lbaf to requirements in editable mode #376: add .egg-info files to gitognore #376: add run configuration for vscode to help debugging in vscode #376: refactor and clean code #376: refactor fix tests imports #376: remove unnecessary statements #376: refactor and updates #376: update package config and clean import statements #376: fix module init #376: fix previous introduced error in rank_object_enumerator #376: fix quotes #376: add missing dependency to matplotlib in setup.cfg and refactoring #376: fix pylint warnings #376: change quotes #376: fix trailing white space and quotes #376: rename LBAF back to LBAF_app #376: restore acceptance tests with python 3.9 #376: try fix libxrender error with python3.9 #376: try fix stepper test in python 3.9 #376: rename project_dir to project_path for consistency #376: refactor #376: fix logger issue #376: fix bad argument #376: update pylint pragmas #376: update import of SchemaValidator #376: fix lazy import of schema validator #376: fix conflicts for merging branch * #376: remove unused files * #376: remove unused common.py module * #376: fix function defined twice * #376: fix merge issues and pytlint errors
* #355: add vt writer unit test for a null test * #355: sort keys in vt writer null test output * #355: add schema validator and update configuration file * #355: enable test to ignore some keys and ordering * #355: use PhaseStepper algorithm and auto-detect of schema optional keys to ignore * #355: fix migratable value output in VTDataWriter * #355: try fix possible missing package for github actions * #355: try fix root access on gh action * #355: try fix XServer issue on Gh Actions * #355: another try with XServer * #355: try add DISPLAY env var for gh actions * #355: try again x-server fix * #355: try another xvfb port * #355: remove LBAF_Viz from config for gh actions to not require x server * #355: clean code and add code comments * #355: fix missing empty line * #355: fix missing empty line * #355: update some comment * #355: sort .gitignore lines * #355: update comment
* #347: remove theme option and refactor logging module and LBAF_app * #347: raise error if save_meshes is True in a python 3.9 execution environment * #347: remove color formatting in logger if not console logger * #387: move error raising on save_meshes to the Visualizer class * #387: add VSCode run configuration for Python 3.9 * #347: improve configuration upgrader to support keeping comments defined at top of config file & add bool representer * #347: remove terminal_background option using the configuration_upgrader * #347: remove terminal_background option from configuration schema and from docs * #347: logging module refactoring and add comments * #347: fix bad variable * #347: fix issue in upgrader and restore and update conf.yaml comments * #347: fix trailing whitespace * #347: update conf.yaml docs * #347: upgrade docs for conf.yaml * #347: upgrade docs for conf.yaml * #347: upgrade docs for conf.yaml * #347: use single quotes for single characters throughout entire code base * #347: add colon before starting itemization in docstring * #347: fix typo and quotes in a yaml file
* #353: display error on invalid object_qoi or rank_qoi value * #353: automatic set n_ranks in the LoadReader * #353: Fix conflict with yaml files * #353: Fix conflict in 1 file * #353: LoadReader autodetection of n_ranks and update LoadReader constructor * #353: improve code quality * #353: remove trailing whitespace * #353: remove n_ranks remaining in some configuration files * #353: fixbug with acceptance tests * #353: remove remaining n_ranks refs in rst files * #353: remove remaining n_ranks refs in rst files * #353: add missing n_ranks key to the test configurations using from_samplers * #353: add missing n_ranks key to the another test configuration using from_samplers
…ete the rest (#398) * #386: upgrade rank_object_enumerator script to work * #386: move used function of rank_object_enumerator to lbsStatistsics module and deprecate rank_object_enumerator * #386: update LBAFApp to work with functions moved to lbsStatistics * #386: update some test brute force config file * #386: fix error in brute BruteForceAlgorithm class * #386: add some bruteforce run configuration for VS code * #386: update VSCode launch configuration * #386: fix problem with refactoring and acceptance tests * #386: remove n_ranks no more valid attribute * #386: fix issue in LBAF_App with n_ranks * #386: fix potential BruteForce invalid phases key * #386: eliminate duplicated code in BruteForceAlgorithm and LBAF_App + use loaded `Object` instances instead of dictionaries * #386: simplify method call * #386: fix bad variable name * #386: set pylint to fail only on error or with score lower that 8.5 * #386: refactor the BruteForce algorithm to exclude duplicated code * #386: refactor and remove duplicated code * #386: improve code quality * #386: improvement in compute_arrangement_works * #386: improve some code * #386: review docstrings with PEP257 in lbaf module and move useful function to lbsStatistics * #386: fix trailing whitespace
…and line (#400) * #396: fix conflicts and make 2 modules callable * #396: fix logger module import * #396: reorganize imports in 2 modules * #396: remove unused file * #396: fix some invalid import * #396: fix bad import * #396: enable to run upgrade_configuration to only reformat a configuration file * #396: remove trailing whitespace
* #368: move stepper tests and acceptance tests to the unittest tests to include in tox * #368: update gitignore * #368: update CI workflow * #368: update CI workflow * #368: update gitignore * #368: rename acceptance to synthetic-acceptance * #386: refactor * #368: rename workflow * #368: fix call error * #368: fix bug in a test * #368: fix bad config path for a test * #368: rename workflow * #368: upgrade tox and colorama dependency versions * #368: create a single requirements.txt file * #368: upgrade colorama version also for lbaf package setup * #368: refactor and simlify tox.ini * #368: rename workflow * #368: remove method duplicate * #368: pylint fixes * #368: pylint fixes * #368: disable some unexpected pylint warnings * #368: remove unnecessary line * #368: tentative to display unit tests results better * #368: keep only one requirements file and try fix Test report action * #368: try another Test report plugin * #368: fix issue with test output * #368: rename tests report * #368: try again another plugin * #368: upgrade version of test report plugin * #368: setoption to report output on CI * #368: fix remaining quotes and warnings * #368: fix pylint notice messages
* #388: Add verbosity level argument to lbaf.app (in progress) * #388: add command line option to print list of implemented QOI * #388: add default verbosity level * #388: print all possible QOI * #388: move verbosity argument within printing function * #388: alter formatting of output * #388: simplify for loop * #388: update --help message, fix typo * #388: more formatting changes to output list * #388: print list as part of error for invalid QOI * #323: add work to r_qoi_list
* #379: create an ApplicationBase class and integrate interactive mode and refactor * #379: fix issue with cli argument * #379: refactor make 3 applications working with common AppicationBase parent class * #379: continue refactoring * #379: wip on refactoring * #379: add args option to Applciation run method to not use argument parser and fix bugs * #379: replace ApplicationBase by RunnerBase in Utils and much refactoring for it * #379: continue refactoring and rename modules * #379: fix pylint messages * #379: fix names * #379: fix DataStatsFileUpdater and RunnerBase type support * #379: refactor introduce PromptArgParser for utilities and apps using cli to remove RunnerBase and sort imports * #379: put except_hook only on script or application startup and rename scripts with lbs prefix * #379: fix unit test due to exception class changed * #379: logger parameter name consistency * #379: formatting * #379: refactor exception handler and introduce TerseError class * #379: fix unit test error * #379: fix pylint error and warnings * #379: fix trailing whitespace * #79: fix unit tests * #379: restore names only for applications as in develop * #379: fix issue in VT Validator Loader * #379: update README with new console commands from lbaf package * #379: update README * #379: update README * #379: remove exception handler and clean code
* #323: moved all messaging logic to inform and transfer algo * #323: separated out load information * #323: simplified code by makings "targets" a set instead of dict * #323: added "estimate" method to criteria for non-local information (distributed) * #323: Fix whitespace error * #323: Update tests to reflect changes in Rank * #323: create test for InformAndTransferAlgorithm * #323: progress update (refactored messages now processed and relayed) * #323: fixed debug statement * #323: fixed initial spawning and aggregation of initial messages * #323: completed refactoring of information stage * #323: made transfer algorithms work again with refactored information * #323: fixed test errors * #323: removed useless header comments * #323: displaced CMF calculation where it belongs * #323: fix unit tests to reflect changes in lbsMessage and lbsRank * #323: finalize InformAndTransfer testing and fix typos in Rank --------- Co-authored-by: Caleb Schilly <cwschilly@gmail.com>
* #324: memory: implement centralized memory-constrained algorithm * #324: removed unused import * #324: Phase not used by centralized algo * #324: reorganized constructor * #324: deleted confusing (and incorrect) control flow log --------- Co-authored-by: Philippe P. Pébaÿ <philippe.pebay@ng-analytics.com>
* #414: resolved inconsistencies in treatment of average load between strategies * #414: entire rework of the rank/target selection process * #414: refactoring and factoring out of CMF-based selection of target * #414: completed rework of transfer/reject logic and reporting thereof * #414: simplification of recursive flow * #414: doc * #414: whitespace cleanup * #414: fixed trailing WS and docstring Signed-off-by: Philippe P. Pébaÿ <philippe.pebay@ng-analytics.com> * #414: allow for deteministic rank order * #414: PR fixed and added cluster randomization --------- Signed-off-by: Philippe P. Pébaÿ <philippe.pebay@ng-analytics.com>
…ronment (#425) * #376: make lbaf runnable with multiple lbaf versions * #376: make tests use lbaf source instead of lbaf package * #376: make the 6 runnable scripts load lbaf module if package not found * #376: update README * #376: update README and remove default lbaf package install from requirements.txt * #376: remove trailing whitespaces in REAME.md * #376: remove unnecessary import * #376: fix lbaf module path
* #428: allowing swaps of empty clusters from target * #428: testing clustering strategy and showing max memory * #428: allow empty clusters on source; and better printouts * #428: Skip trivial swaps and provide better information printouts * #428: changed execution logic to allow only one target for swaps; also randomization * #428: further improved execution speed and printouts * #428: removed leftover debug code
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