Accompanying repository for the paper: "Machine Learning Classification of Trajectories from Molecular Dynamics Simulations of Chromosome Segregation"

Content: Machine learning models for the classification of different modes of replication and segregation in bacteria.

Documentation

• the trained models and their corresponding train and test sets should be copied to ML-models/

• they can be downloaded from this repository

• scripts to evaluate the models and reproduce the results mentioned in the paper are stored in evaluation/

  • classification results for the complete trajectories can be reproduced with the notebook in complete-trajectories/
  • classification results for short trajectories can be reproduced with the notebook in short-trajectories/

Support & Feedback

Questions or suggestions can be directed to Peter Lenz or David Geisel.