v3.0.2

Full Changelog: v3.0.1...v3.0.2

v3.0.1

Full Changelog: v3.0.0...v3.0.1

v3.0.0

What's Changed

• Rewrite of the ENA API Handler by @arajkovic in #40

New Contributors

• @arajkovic made their first contribution in #40

Full Changelog: v2.0.4...v3.0.0

Bugfix release

What's Changed

• Bump requests from 2.28.1 to 2.31.0 by @dependabot in #27
• Refactor some get_assembly and get_study_runs to retry with different portals by @mberacochea in #32
• Develop by @mberacochea in #33

New Contributors

• @dependabot made their first contribution in #27

Full Changelog: v2.0.3...v2.0.4

Bugfix release

What's Changed

• Hotfix - empty json return by @SandyRogers, @Vkale1 and @KeteSakharova in #29
• Added the "status" field for Runs by default by @mberacochea in #30

Full Changelog: v2.0.2...v2.0.3

Allow assembly downloads from ena portal when metagenome fails

• get_study_assemblies will attempt to fetch from ena portal if the metagenome portal returns an empty result
• change json decoding to json from requests

Better error handling and samples metadata fields migration

What's Changed

• Improve ENA error handling, surface the API errors for easier debugging. by @mberacochea in #26
  Full Changelog: v2.0.0...v2.0.1

The "sample" fields that changed:

1. host_scientific_name -> host
2. environmental_package -> ncbi_reporting_standard

Environmental package was deprecated by the GSC.

ENA Portal API v2.0 migration

What's Changed

• Upgrade dep - requests, drop 3.6 in GHA by @mberacochea in #24
• Switch to api v2 by @KeteSakharova in #25

Full Changelog: v1.2.1...v2.0.0

Extra field for RUNS - status_id

Merge pull request #23 from EBI-Metagenomics/develop

Merge - run_reads status_id field

1.2.0

Merge pull request #22 from EBI-Metagenomics/develop

Bump version -> v1.2.0