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Merge master ctsm5.4.031 to b4b-dev#3919

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samsrabin merged 26 commits intoESCOMP:b4b-devfrom
samsrabin:merge-master-to-b4bdev-20260409
Apr 10, 2026
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Merge master ctsm5.4.031 to b4b-dev#3919
samsrabin merged 26 commits intoESCOMP:b4b-devfrom
samsrabin:merge-master-to-b4bdev-20260409

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Description of changes

Merging back to b4b-dev.

Jessica Needham and others added 26 commits October 13, 2025 11:36
Change to using the ifx compiler and some more fixes

Updates ccs_config to 1.0.75 which has the new ifx compiler in use for derecho_intel, as well as updating to using ESMF8.9.0. This exposed problems in the code on two fronts when running with DEBUG mode:

Reliance on short-circuiting in if statements
Problems with NaN's, in datasets especially _FillValue
For the former, we changed code to break up if statements so this would work. And with the latter we point to new datasets with the NaN's handled. mosart and cdeps code also had short-circuiting problems.

@samsrabin created a script to examine all of the files in namelist_defaults_ctsm.xml and in the testmod directories to check if there were problems with NaN's in _FillValues. The modified files here all were the result
of the first pass of that script. The new files all have a ".no_nan_fill.nc" ending on them.

Includes updating submodules: ccs_config, cdeps, mosart
Add build namelist check for the landuse mode transitional ruleset
Transfer biophysical variables for output with FATES dimensions

This pull request updates the high frequency wrapper procedure in the interface to pass
biophysical CLM variables to be output along FATES dimensions. The FATES land use x
pft dimension is also added to the history module.  The FATES base land use test module
adds the FATES history noted above to the test output.
Merge b4b-dev to master

- Various documentation updates
- Update submodules to ones in cesm3_0_alpha08l
- Bugfix for FatesSp compiled with intel

PR ESCOMP#3894
ctsm5.4.030: Add a FATES namelist option for land use transition logic
Add a FATES namelist option for land use transition logic
ctsm5.4.031: Merge b4b-dev to master 2026-04-09
@samsrabin samsrabin self-assigned this Apr 10, 2026
@samsrabin samsrabin merged commit d4f4d6d into ESCOMP:b4b-dev Apr 10, 2026
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3 participants