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15 changes: 5 additions & 10 deletions src/ensembl/production/metadata/api/models/assembly.py
Original file line number Diff line number Diff line change
Expand Up @@ -57,15 +57,10 @@ class AssemblySequence(Base):
length = Column(Integer, nullable=False)
sequence_location = Column(String(10))
md5 = Column(String(32))
# column need renaming as well
sha512t24u = Column(String(128))
sha512t4u = Column(String(128))
# One to many relationships
# none
# many to one relationships
# assembly_id within assembly
assembly = relationship('Assembly', back_populates="assembly_sequences")

# backward compatibility with old column name sha512t2u
@property
def sha512t2u(self):
return self.sha512t24u

@sha512t2u.setter
def sha512t2u(self, checksum):
self.sha512t24u = checksum
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@ CREATE TABLE assembly_sequence
chromosome_rank int null,
sequence_location varchar(10) null,
md5 varchar(32) null,
sha512t24u varchar(128) null,
sha512t4u varchar(128) null,
constraint assembly_sequence_assembly_id_accession_5f3e5119_uniq
unique (assembly_id, accession),
constraint assembly_sequence_assembly_id_2a84ddcb_fk_assembly_assembly_id
Expand Down