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This update fixes several small issues:
species taxonomy id will be populated and common name will be present.
It also uses the dataset factory for dataset creation and creates homology datasets as well.
The previously broken tests have been fixed, but will need future work as they are interdependent.

Fixed assembly sequence reload bug
Fixed a few associated tests that had been commented out
Updated source to handle compara
Added homology dataset creation
Upper case for common name
Default species taxonomy id
Fixed broken tests
Added license for genome_uuid_manager.py
@dpopleton dpopleton added the enhancement New feature or request label Mar 12, 2024
@dpopleton dpopleton requested review from marcoooo and vinay-ebi March 12, 2024 09:48
@dpopleton dpopleton self-assigned this Mar 12, 2024
@dpopleton dpopleton requested review from marcoooo and vinay-ebi March 12, 2024 10:32
@dpopleton dpopleton merged commit 55a2554 into main Mar 12, 2024
@dpopleton dpopleton deleted the updates/dataset_factory_updater branch March 22, 2024 14:15
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4 participants