Skip to content

History

Revisions

  • Update the wiki for the EpiModel 2.7.0 release Use the named set_epi(dat, name, value, at = at) form in the Getting Started exercise and the code conventions, which works on EpiModel 2.6.x and 2.7.0. Add troubleshooting for the 2.7.0 set_epi() error and the EpiModelHIV 3.3.4 requirement, note that restart points must be remade after a minor-version upgrade, say that 2.7.0 fixes partial vector scenarios, and explain the shift in the time column of restarted runs.

    @smjenness smjenness committed Oct 17, 2026
    c420602

  • Add calibration and restart point pages, and note the shared Spack recipes Calibrating a Model and Making a Restart Point cover the Template's chapter C workflows, including the new workflow-restart_point.R, with lessons from the LA-PrEP CABARET calibration. The Spack page no longer warns about a 1.2 GB first-run download, since the lab now shares one copy of the recipes.

    @smjenness smjenness committed Oct 12, 2026
    053abae

  • Record the retired shared items in the admin notes

    @smjenness smjenness committed Oct 12, 2026
    be158c1

  • Reorganize the wiki as a learning path and update it for current practice Rewrites most pages against the current EpiModelHIV-Template (v3.3.x), R 4.6.1 and 4.5.1 via Spack, and the current RSPH partitions. Adds pages for local setup, HPC rules and storage, job monitoring, project workflows, processing results, a glossary, and contributing, plus a sidebar and footer. Merges overlapping pages and fixes names, keeping the page names and anchors that other repos link to.

    @smjenness smjenness committed Oct 12, 2026
    a6e7ac8

  • Updated Writing and Debugging EpiModel Code (markdown)

    @smjenness smjenness committed Oct 22, 2025
    33472ce

  • Updated Coding Good Practices and Some Tips (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 1, 2025
    8e32941

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Mar 27, 2025
    067b1bb

  • Created Coding Good Practices and Some Tips (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Mar 27, 2025
    6d9c973

  • Updated EpiModelHIV ‐ code conventions (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    148c6fc

  • Updated EpiModelHIV ‐ code conventions (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    74fc505

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    d4712da

  • Updated EpiModelHIV ‐ code conventions (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    e4bf534

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    1f43425

  • Created EpiModelHIV ‐ code conventions (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Dec 13, 2024
    f70e770

  • Updated Miscellaneous HPC administration infos (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Oct 17, 2024
    d214407

  • Updated Setting up your HPC environment (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed May 21, 2024
    e0d3770

  • Updated Working with files on the HPC (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed May 13, 2024
    f359eaf

  • Updated EpiModelHIV ‐ New Parameters and Attributes (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 18, 2024
    81fde32

  • Updated EpiModelHIV ‐ New Parameters and Attributes (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 18, 2024
    46539dc

  • Updated EpiModelHIV ‐ New Parameters and Attributes (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 18, 2024
    585465d

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    e3aba12

  • Updated Adding features to EpiModelHIV ‐ new parameter and attributes (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    ecf503b

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    9e8f2ed

  • Updated Adding features to EpiModelHIV (new parameter and attributes) (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    48c737f

  • Updated Adding features to EpiModelHIV (new parameter and attributes) (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    45e46fc

  • Created Adding features to EpiModelHIV (new parameter and attributes) (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Apr 17, 2024
    d87711b

  • Updated Getting Started with EpiModelHIV (markdown)

    @smjenness smjenness committed Mar 28, 2024
    52bdd0d

  • Updated Spack Environments (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Jan 17, 2024
    4f5255b

  • Updated Home (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Jan 16, 2024
    35a75c0

  • Created Spack Environments (markdown)

    @AdrienLeGuillou AdrienLeGuillou committed Jan 16, 2024
    10a36a7