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MAPL 2.43.0

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@mathomp4 mathomp4 released this 21 Dec 14:44
· 459 commits to main since this release
65c37d3

DOI

This is a minor release of MAPL. It has various updates and fixes as delineated below. Some highlights are:

  • Updates for ongoing work with trajectory and station sampling
  • Examples on how to use the Automatic Code Generator
  • Fixes for use of the MAPL Python code with Python 3
  • Fixes for GCC 13 which is still NOT SUPPORTED but this allows for further testing
  • Fix to allow ExtData2G to be built as static library

MAPL is currently tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF


From CHANGELOG.md

Added

  • Station sampler: add support to Global Historical Climatology Network Daily (GHCN-D)
  • Add to trajectory sampler DEFINE_OBS_PLATFORM for reading multiple IODA files. To do this, we add union_platform function for observation.
  • New directory (docs/tutorial/grid_comps/automatic_code_generator) containing an example showing how to automatically generate the source code using the MAPL_GridCompSpecs_ACG.py tool.
  • Added/modified a few _ASSERT calls in ExtData, to better explain what is wrong in .yaml file

Changed

  • Change the verification of the grid in MAPL_GetGlobalHorzIJIndex to avoid collective call
  • Swath grid step 1: allow for destroying and regenerating swath grid and regenerating regridder route handle, and creating
    allocatable metadata in griddedIO. Modifications are made to GriddedIO.F90, MAPL_AbstractRegridder.F90, and MAPL_EsmfRegridder.F90.
  • Swath grid step 2: add control keywords for swath grid. Allow for filename template with DOY. Allow for missing obs files. User needs to specify index_name_lon/lat, var_name_lon/lat/time, tunit, obs_file_begin/end/interval, Epoch and Epoch_init.
  • Update CI to Baselibs 7.17.0 (for future MAPL3 work) and the BCs v11.3.0 (to fix coupled run)
  • Update components.yaml
    • ESMA_env v4.24.0 (Baselibs 7.17.0)
  • Update CI to use circleci-tools v2
  • Changed the Python MAPL __init__.py file to restore behavior from pre-Python3 transition where we did from foo import *. Also fix up other Python2 code to Python3.

Fixed

  • Fixed bug broken multi-step file output in History under certain template conditions
  • [#2433] Implemented workarounds for gfortran-13
  • Missing TARGET in GriddedIO - exposed runtime error when using NAG + debug.
  • Allow ExtData2G to be built as SHARED or STATIC

What's Changed

  • Automatic Code Generator Sample Code (0 diff) by @JulesKouatchou in #2420
  • avoid collective call inside subroutine MAPL_GetGlobalHorzIJIndex by @weiyuan-jiang in #2436
  • Auto GitFlow - main → develop by @github-actions in #2442
  • Fixes #2433 Minor changes for gfortran-13. by @tclune in #2443
  • Auto GitFlow - main → develop by @github-actions in #2449
  • Update CI and components to match latest GEOSgcm by @mathomp4 in #2459
  • Swath grid for MAPL_HistoryGridComp by @metdyn in #2458
  • Auto GitFlow - main → develop by @github-actions in #2461
  • Auto GitFlow - main → develop by @github-actions in #2472
  • Update to circleci-tools v2 orb; ESMA_env v4.24 by @mathomp4 in #2466
  • Auto GitFlow - main → develop by @github-actions in #2480
  • Auto GitFlow - main → develop by @github-actions in #2488
  • fixes #2487 by @bena-nasa in #2490
  • Bump actions/upload-artifact from 3 to 4 by @dependabot in #2493
  • Fixes #2499: Allow ExtData2G to be built static by @mathomp4 in #2500
  • Print helpful information for certain ExtData problems. by @mmanyin in #2452
  • Add type obs_platform to Trajectory Sampler by @metdyn in #2465
  • Station sampler: add support to Global Historical Climatology Network Daily (GHCN-D) by @metdyn in #2477
  • Restore MAPL Python2 import behavior by @mathomp4 in #2496
  • Prepare for MAPL 2.43.0 release by @mathomp4 in #2503
  • GitFlow: Merge develop into main for release by @mathomp4 in #2504

New Contributors

Full Changelog: v2.42.4...v2.43.0