ISOFIT SMCE PCluster

Install directory /shared-ebs/software/isofit

module load singularity/4.3.4

singularity build --sandbox isofit_v3.7.5 docker://serbinsh/isofit_smce:multiarch_v3.7.5

singularity build --sandbox isofit_v3.7.5 isofit_v3.7.5.sif

singularity build isofit_v3.7.5.sif docker://serbinsh/isofit_smce:multiarch_v3.7.5

singularity shell --no-home --writable-tmpfs /shared-ebs/software/isofit/isofit_v3.7.5.sif

singularity exec --no-home --writable-tmpfs /shared-ebs/software/isofit/isofit_v3.7.5.sif /bin/bash

singularity run --no-home --writable-tmpfs /shared-ebs/software/isofit/isofit_v3.7.5.sif isofit --version

Setting up ISOFIT for use with Singularity singularity run --no-home --writable-tmpfs /shared-ebs/software/isofit/isofit_v3.7.5.sif isofit download --help

singularity run --no-home --writable-tmpfs -bind /Users/sserbin/scratch/isofit_home:/home/mambauser/.isofit
-v /Users/sserbin/scratch/isofit_data_docker:/isofit_data serbinsh/isofit_smce:multiarch_v3.7.5
isofit -b /isofit_data download all