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GianfrancoBotta/README.md

About Me

I'm a passionate bioinformatician with a keen interest in personalized medicine. My goal is to employ statistics and machine learning to discover personalized therapies that best suit each individual. This GitHub account serves as a platform to showcase my work, collaborate with the community, and continually learn and grow.

Projects

Here are some of the key projects you'll find in this repository:

  • RNA-seq differential expression and ATAC-seq analysis of the data provided in the paper Krausgruber et al.
  • Segmentation and classification of cell nuclei from histopathological images

Feel free to explore each project's dedicated folder for more details.

Get in touch

I love connecting with open-source enthusiasts, and anyone interested in the exciting world of personalized medicine. You can reach out to me via email or LinkedIn, and I'm always open to discussions, collaborations, or just a friendly chat.

Email: gianfranco.botta7@gmail.com

LinkedIn

Support

If you find any issues, have suggestions, or just want to say hi, feel free to open an issue or submit a pull request. Your feedback is highly appreciated and contributes to making this space better for everyone.

Thanks for stopping by! 🚀

Popular repositories Loading

  1. SEGMENTATION SEGMENTATION Public

    Improving HoVer-Net on a local setup by employing the asymmetric unified focal loss function for segmentation and classification of cell nuclei from histopathological images.

    Jupyter Notebook 1 3

  2. RNA-ATAC-seq_analysis RNA-ATAC-seq_analysis Public

    RNA-seq and ATAC-seq analysis from scratch of the data provided by the paper "Structural cells are key regulators of organ-specific immune responses"

    HTML

  3. GianfrancoBotta GianfrancoBotta Public

    Config files for my GitHub profile.

  4. phyloDNAsim phyloDNAsim Public

    Tumor phylogenetic data simulator for bulk, single-cell and circulating DNA-seq (both targeted and whole-genome sequencing are supported).

    Python