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v1.9.1

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@edg1983 edg1983 released this 29 Nov 10:22
· 21 commits to main since this release
v1.9.1
ca26e1b

Updates in this release:

  • Move to regenie version 3.3
  • This release fixes problems with conditional / interaction analysis. To ensure consistency of conditional / interaction analysis across chunks, you must provide an additional genotype dataset containing the SNPs you want to condition on (or test interaction for).
  • There are 2 new parameters to specify the additional dataset for conditional / interaction testing: additional_geno_file and additional_geno_format. See the documentation for more details.
  • Fix the issue causing specified chromosome(s) to be ignored when using a bgen input
  • Fix the issue with reports when there were no hits passing the top-hits threshold
  • Require Nextflow version < 23.07 to avoid problems in report generation due to the new --no-home default for singularity in newer Nextflow versions
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