Problem with importing publications with Cli

[bjmbraun]

To import publications from a BibTex file exported from Zotero I've followed the instructions for the Hugo Academic Cli tool (https://github.com/wowchemy/hugo-academic-cli and https://wowchemy.com/docs/content/publications/).

The command academic import --bibtex data/publications.bib produces a new publication folder and the associated .bib citation file for exactly one publication, but nothing else. No index.md file is generated, and I don't know why. I get the following error code:

Any help would be greatly appreciated, I cannot figure what the problem might be. I'm a Hugo beginner – an obvious error on my part may well be the issue.

[jarrodscott]

I am having a related issue. I followed the same formula and the ran academic import --bibtex data/publications.bib. For each bibtex entry I get a folder with cite.bib and index.md. However, the issue, volume, and pages are not populating the index.md. When I run hugo server I get errors like this:

WARN  HBX WARN: /publications/eren-community-led-2021/ uses the legacy flat `publication` string. Migrate to the structured shape `publication: {name, short_name, volume, issue, pages, publisher}` by running: hugoblox migrate publications
You can suppress this warning by adding the following to your project configuration:
ignoreLogs = ['pub-legacy-/publications/eren-community-led-2021/']
WARN  Top-level `doi` is deprecated. Use `hugoblox.ids: { doi: ... }` in publications/eren-community-led-2021/index.md

so I run hugoblox migrate publications and get error: unknown command 'publications'

Any advice would be appreciated

here is the original bibtex entry before parsing

@article{eren_community-led_2021,
	address = {England},
	title = {Community-led, integrated, reproducible multi-omics with anvi'o.},
	volume = {6},
	issn = {2058-5276},
	doi = {10.1038/s41564-020-00834-3},
	abstract = {Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five  years after anvi’o was first published, this community-led multi-omics platform  is maturing into an open software ecosystem that reduces constraints in ‘omics  data analyses.},
	language = {eng},
	issue = {1},
	journal = {Nature Microbiology},
	author = {Eren, A. Murat and Kiefl, Evan and Shaiber, Alon and Veseli, Iva and Miller, Samuel E. and Schechter, Matthew S. and Fink, Isaac and Pan, Jessica N. and Yousef, Mahmoud and Fogarty, Emily C. and Trigodet, Florian and Watson, Andrea R. and Esen, Özcan C. and Moore, Ryan M. and Clayssen, Quentin and Lee, Michael D. and Kivenson, Veronika and Graham, Elaina D. and Merrill, Bryan D. and Karkman, Antti and Blankenberg, Daniel and Eppley, John M. and Sjödin, Andreas and Scott, Jarrod J. and Vázquez-Campos, Xabier and McKay, Luke J. and McDaniel, Elizabeth A. and Stevens, Sarah L. R. and Anderson, Rika E. and Fuessel, Jessika and Fernandez-Guerra, Antonio and Maignien, Lois and Delmont, Tom O. and Willis, Amy D.},
	month = jan,
	year = {2021},
	keywords = {*Data Analysis, *Software, Big Data, Computational Biology/*methods, Genomics/methods, Humans, Microbiology},
	pages = {3--6},
}

[gcushen]

This is a different warning to the one reported in this thread.

I suggest you open an issue on the relevant repo, https://github.com/HugoBlox/academic-file-converter , to add support for the more granular publication fields. Previously, publication metadata was written as a single publication text field. New versions of HugoBlox allow for a more semantic structure.