This folder contains a MATLAB GUI called Brainmap used in;
- Jiang T, Jiang T, Wang T, Mei S, Liu Q, Li Y, Wang X, Prabhu S, Sha Z, Ince NF. “Characterization and Decoding the Spatial Patterns of Hand Extension/Flexion using High-Density ECoG“. IEEE Trans Neural Syst Rehabil Eng. 2017 Apr;25(4):370-379. doi: 10.1109/TNSRE.2016.2647255.
- Asman P., Prabhu S., Tummala S, and Ince NF. Real-time delineation of the central sulcus with the spatial profile of SSEPs captured with a high-density ECoG grid. 44th EMBC, Scottish Event Campus, Glasgow, UK, July 11-15, 2022 (to appear in proceedings of IEEE EMBC 2022)
This GUI renders the segmented files created with SPM12 to viusalize the 3D image of the brain and allows easy electrode corregistration.
The GUI accepts file segmentation in ".nii" format and creats electrodes for corregistration. We have provdied an example brain .nii file and electrode .mat file (in a zip-file). A user manual, and demo videos have been provided.
When running BrainMap after setup, if the following error is encountered : ["src.java.checkboxtree.FileLoadTree.FileLoadTree" fails the test]
- Please install Java JRE following this link: https://www.thecoderworld.com/how-to-install-java-jre-on-windows-11/
- Restart computer and
- Run brainmap setup again.
For more information/code please email: itasnim@uh.edu