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Mar 20, 2022
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V0p3p11f #72

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d4cdde0
add links to ClimateTools and ClimateBase
gaelforget Mar 20, 2022
57de3b2
trigger workflow + improve links
gaelforget Mar 20, 2022
85926e9
add NetCDF.jl and Zarr.jl to page list
gaelforget Mar 20, 2022
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2 changes: 1 addition & 1 deletion .github/workflows/DeployPage.yml
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Expand Up @@ -3,7 +3,7 @@ on:
push:
branches:
- master
- v0p3p11e
- v0p3p11f
jobs:
build-and-deploy:
runs-on: ubuntu-latest
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13 changes: 7 additions & 6 deletions page/index.md
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Expand Up @@ -23,7 +23,7 @@ The notebooks mostly come from the `examples` section of a Julia package.
- Models / [MITgcmTools.jl](#mitgcm-tools) examples
- [MeshArrays.jl](#mesh-arrays) examples
- [IndividualDisplacements.jl](#individual-displacements) examples
- [NetCDF](#netcdf)
- [Files & NetCDF](#files)
- [Workshops](#workshop)

The [User Directions](#directions) section is for those interested in running notebooks themselves.
Expand All @@ -40,7 +40,7 @@ The `ClimateModels.jl` package provides an interface to models often used in cli
An important requirement in climate science is to derive transports using native model grid output to e.g. precisely close energy budgets. This is one of the applications of `MeshArrays.jl` -- the analysis of global transports derived from gridded model output. Topics covered via `MeshArrays.jl` also include interpolation and geography.

`IndividualDisplacements.jl` extends this approach by providing a [particle tracking](https://en.wikipedia.org/wiki/Lagrangian_and_Eulerian_specification_of_the_flow_field) framework that readily operates on climate model `C-grids` using `MeshArrays.jl`.
Examples that let you access and explore ocean data products are provided in `OceanRobots.jl` and `OceanStateEstimation.jl`. The `miscellaneous` section touches on topics such as files (incl. NetCDF and Zarr), visualization, cloud services, and user directions.
Examples that let you access and explore ocean data products are provided in `OceanRobots.jl` and `OceanStateEstimation.jl`. The `More` section touches on topics such as files (incl. NetCDF and Zarr), visualization, cloud services, and user directions.

**Visual Examples**

Expand Down Expand Up @@ -154,14 +154,15 @@ In this section, we provide additional representative examples that cover common

\label{more}

**NetCDF**
**Files & NetCDF**

\label{netcdf}
\label{files}

- [NetCDF\_basics.jl](NetCDF_basics.html) ([notebook url](https://raw.githubusercontent.com/JuliaClimate/Notebooks/master/tutorials/NetCDF_basics.jl)) is a brief tutorial that opens a netCDF file using [NCDatasets.jl](https://alexander-barth.github.io/NCDatasets.jl/latest/) and plots a 2D slice as a heatmap using [Makie.jl](https://makie.juliaplots.org/stable/).
- [NetCDF\_packages.jl](NetCDF_packages.html) ([notebook url](https://raw.githubusercontent.com/JuliaClimate/Notebooks/master/tutorials/NetCDF_packages.jl)) reviews packages for ingesting NetCDF into various data structures.
- [NetCDF\_packages.jl](NetCDF_packages.html) ([notebook url](https://raw.githubusercontent.com/JuliaClimate/Notebooks/master/tutorials/NetCDF_packages.jl)) reviews packages for ingesting NetCDF into various data structures; including [ClimateBase.jl](https://juliaclimate.github.io/ClimateBase.jl/dev/) and [ClimateTools.jl](https://juliaclimate.github.io/ClimateTools.jl/dev/).
- [NetCDF\_advanced.jl](NetCDF_advanced.html) ([notebook url](https://raw.githubusercontent.com/JuliaClimate/Notebooks/master/tutorials/NetCDF_advanced.jl)) uses a large file to look at performance.
- [NCTiles.jl](https://gaelforget.github.io/NCTiles.jl/dev) converts binary data into meta-data-rich [NetCDF](https://en.wikipedia.org/wiki/NetCDF) files for (1) a simple rectangular grid; (2) a tiled domain distributed over multiple files.

Other packages : [NetCDF.jl](https://juliageo.github.io/NetCDF.jl/dev) provides high-level and medium-level interfaces for writing and reading netcdf files. [Zarr.jl](https://juliaio.github.io/Zarr.jl/latest/) supports reading and Writing Zarr Datasets from Julia. [NCTiles.jl](https://gaelforget.github.io/NCTiles.jl/dev) converts binary data into meta-data-rich [NetCDF](https://en.wikipedia.org/wiki/NetCDF) files for (1) a simple rectangular grid; (2) a tiled domain distributed over multiple files.

**Workshops**

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4 changes: 3 additions & 1 deletion tutorials/NetCDF_packages.jl
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Expand Up @@ -6,7 +6,7 @@ using InteractiveUtils

# ╔═╡ 7306f20f-9da1-4419-9222-1704fd296ee8
begin
using ClimateBase, Downloads, Dates, PlutoUI
using ClimateBase, NCDatasets, Downloads, Dates, PlutoUI
"Done with loading packages"
end

Expand Down Expand Up @@ -125,10 +125,12 @@ PLUTO_PROJECT_TOML_CONTENTS = """
ClimateBase = "35604d93-0fb8-4872-9436-495b01d137e2"
Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
Downloads = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
NCDatasets = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8"

[compat]
ClimateBase = "~0.15.1"
NCDatasets = "~0.11.9"
PlutoUI = "~0.7.36"
"""

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