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DesignPrinciplesGeneNetworks
DesignPrinciplesGeneNetworks PublicA collection of functions and tools to analyze Boolean gene regulatory networks
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BooleanCanalization
BooleanCanalization PublicContains a set of algorithms to compute the canalizing structure of Boolean functions
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Repositories
- BoolForge Public
Generates and analyzes random Boolean functions and networks with a focus on the concept of canalization
KadelkaLab/BoolForge’s past year of commit activity - boolforge-uniform-samplers Public
Function-uniform sampling algorithms for canalizing Boolean functions, including exact samplers for canalizing functions with exact canalizing depth and rejection-corrected samplers for k-canalizing functions.
KadelkaLab/boolforge-uniform-samplers’s past year of commit activity - AttractorCoherence Public
KadelkaLab/AttractorCoherence’s past year of commit activity - MultistateGRN Public
KadelkaLab/MultistateGRN’s past year of commit activity - modularity_evolution Public
KadelkaLab/modularity_evolution’s past year of commit activity - MultiStateStableMotifs Public
KadelkaLab/MultiStateStableMotifs’s past year of commit activity - PerspectiveCanalization Public
KadelkaLab/PerspectiveCanalization’s past year of commit activity - nondegenerate-canalization Public
Python code to reproduce all figures and numerical results from “On the number of non-degenerate canalizing Boolean functions.” Includes exact recursive computation of the prevalence of k-canalizing functions with specified numbers of essential inputs, and scripts for visualizing results.
KadelkaLab/nondegenerate-canalization’s past year of commit activity - DesignPrinciplesGeneNetworks Public
A collection of functions and tools to analyze Boolean gene regulatory networks
KadelkaLab/DesignPrinciplesGeneNetworks’s past year of commit activity
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