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HIVGenoPipe

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@wzchang wzchang released this 07 Feb 00:55
· 16 commits to main since this release
v1.0.0
b01ac94

HIVGenoPipe is a Nextflow pipeline to detect HIV-1 drug resistance using a sample-specific reference sequence which is generated with the hybrid of de novo and reference-based assembly strategies. The pipeline can generate more accurate consensus sequence at user-defined variant frequency, leading to more accurate drug resistance calls for use by clinicians.

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