fix: harden compression core and IO regressions#1
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- fix FASTQ parser error indexing, sampling state restore, and CR-only trimming - fix block payload offset handling for extended headers - fix single-thread outputBytes accounting to final archive size - fix backpressure reset wake-up semantics - fix quality decompression behavior on empty payload with non-empty lengths - widen long-read position tracking to uint32 and improve PE diff accounting - add focused regression tests and register new test targets Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
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Summary\n- harden FASTQ parser error reporting and sampling state restoration\n- fix extended block-header payload offset handling in archive reader\n- fix single-thread output size accounting and backpressure reset wakeups\n- harden quality decompression empty-payload behavior\n- widen long-read position tracking and PE diff handling to avoid overflow\n- add focused regression tests for parser, reader, pipeline and algo paths\n\n## Verification\n- ./scripts/test.sh clang-debug\n- ./scripts/lint.sh format-check