Few-shot Biomedical NER via Multi-task Learning and More Fine-grained Grid-tagging Strategy(MMG)

MMG code is available at https://github.com/MWXGOD/MMG

1. Environments

- python (3.8.12)
- cuda (11.4)

2. Dependencies

- numpy (1.21.4)
- torch (1.10.0)
- gensim (4.1.2)
- transformers (4.13.0)
- pandas (1.3.4)
- scikit-learn (1.0.1)
- prettytable (2.4.0)

3. Dataset

We provide some datasets processed in our code.

4. Training

>> python main-run-start-end-mul-out-1-new-decoding.py --config ./config/BC5CDR.json --shot 5-1 --learning_rate 0.003 --epochs 20 --loss2_weight '0.2' --loss3_weight '0.2'