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Welcome to Multiplierz, the open-source MS proteomics analysis package! This wiki contains an overview and general how-to to help you use the basic features of the Multiplierz codebase.

This documentation is still under construction; if you have questions that aren't answered here, email williamM_alexander@dfci.harvard.edu.

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Table of Contents

1. Installation
2. mzAPI
3. mzSearch
4. mzReport
5. mzTools
6. Mass Biochemistry
7. Spectral Processing
8. MGF Tools
9. FASTA Tools
10. Post-Processing Tools