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PALEOMIX v1.2.12

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@MikkelSchubert MikkelSchubert released this 13 Aug 10:00
· 719 commits to main since this release

Fixed

  • Fixed input / output files not being listed in 'pipe.errors' files.
  • Use the same max open files limit for picard (ulimit -n minus headroom)
    when determining if the default should be changed and as the final value.

Added

  • The 'vcf_to_fasta' command now supports VCFs containing haploid genotype
    calls, courtesy of Graham Gower.

Changed

  • Require Pysam version 0.10.0 or later.