PALEOMIX v1.3.7

Added

• Added example to BAM pipeline YAML template, showing how to increase the maximum
  allowed Phred score for AdapterRemoval. This is needed due to the value being
  capped at 41 by default, lower than the maximum observed in some modern data.

Fixed

• Fixed regression in config file parsing, that would cause failure if no value
  was specified for an option.
• Fixed error message not being printed correctly when attempting to use Phred+64
  data with BWA mem/bwasw.
• Fixed regressions that prevented the use of "regions of interest" in the BAM
  pipeline.
• Fixed failure when using --list-output-files and auxilary files were missing
  or dependecies were unmet. Output files are now printed.