Bump the python-packages group with 5 updates

[dependabot]

Bumps the python-packages group with 5 updates:

Package	From	To
sqlalchemy	2.0.45	2.0.46
pytest-deadfixtures	3.0.0	3.1.0
prek	0.2.28	0.3.0
setuptools-git-versioning	2.1.0	3.0.1
sphinx-design	0.6.1	0.7.0

Updates sqlalchemy from 2.0.45 to 2.0.46

Release notes

Sourced from sqlalchemy's releases.

2.0.46

Released: January 21, 2026

typing

• [typing] [bug] Fixed typing issues where ORM mapped classes and aliased entities could not be used as keys in result row mappings or as join targets in select statements. Patterns such as row._mapping[User], row._mapping[aliased(User)], row._mapping[with_polymorphic(...)] (rejected by both mypy and Pylance), and .join(aliased(User)) (rejected by Pylance) are documented and fully supported at runtime but were previously rejected by type checkers. The type definitions for _KeyType and _FromClauseArgument have been updated to accept these ORM entity types.

  References: #13075

postgresql

• [postgresql] [bug] Fixed issue where PostgreSQL JSONB operators _postgresql.JSONB.Comparator.path_match() and _postgresql.JSONB.Comparator.path_exists() were applying incorrect VARCHAR casts to the right-hand side operand when used with newer PostgreSQL drivers such as psycopg. The operators now indicate the right-hand type as JSONPATH, which currently results in no casting taking place, but is also compatible with explicit casts if the implementation were require it at a later point.

  References: #13059

• [postgresql] [bug] Fixed regression in PostgreSQL dialect where JSONB subscription syntax would generate incorrect SQL for cast() expressions returning JSONB, causing syntax errors. The dialect now properly wraps cast expressions in parentheses when using the [] subscription syntax, generating (CAST(...))[index] instead of CAST(...)[index] to comply with PostgreSQL syntax requirements. This extends the fix from #12778 which addressed the same issue for function calls.

  References: #13067

• [postgresql] [bug] Improved the foreign key reflection regular expression pattern used by the PostgreSQL dialect to be more permissive in matching identifier characters, allowing it to correctly handle unicode characters in table and column names. This change improves compatibility with PostgreSQL variants such as CockroachDB that may use different quoting patterns in combination with unicode characters in their identifiers. Pull request courtesy Gord Thompson.

... (truncated)

Commits

• See full diff in compare view

Updates pytest-deadfixtures from 3.0.0 to 3.1.0

Release notes

Sourced from pytest-deadfixtures's releases.

3.1.0

* Add `deadfixtures_ignore` decorator to ignore specific fixtures from being reported as unused

Changelog

Sourced from pytest-deadfixtures's changelog.

3.1.0

* Add `deadfixtures_ignore` decorator to ignore specific fixtures from being reported as unused

Commits

• 58fd817 Remove license classifier
• fef94a5 Add documentation for ignoring specific fixtures
• 33a4a02 Add support for ignoring specific fixtures
• See full diff in compare view

Updates prek from 0.2.28 to 0.3.0

Release notes

Sourced from prek's releases.

0.3.0

Release Notes

Released on 2026-01-22.

Highlights

• prek cache gc (also available via prek gc for pre-commit compatibility) is finally here! You can now run prek cache gc to clean up unused repos, hook envs and tool versions from prek cache.

• language: bun is now supported, making it possible to write and run hooks with Bun.

Enhancements

• Implement prek cache gc (#1410)

  • Bootstrap tracking configs from workspace cache (#1417)
  • Show total size prek cache gc removed (#1418)
  • Show accurate repo and hook details in prek cache gc -v (#1420)
  • prek cache gc remove specific unused tool versions (#1422)
  • Fix unused tool versions not removed in prek cache gc (#1436)

• Add language: bun support (#1411)

  • Use git ls-remote --tags to list bun versions (#1439)

• Accept --stage as an alias for --hook-stage in prek run (#1398)

• Expand ~ tilde in PREK_HOME (#1431)

• Support refs to trees (#1449)

Bug fixes

• Avoid file lock warning for in-process contention (#1406)
• Resolve relative repo paths from config file directory (#1443)
• fix: use split() instead of resolve(None) for builtin hook argument parsing (#1415)

Documentation

• Add simple-icons and ast-grep to the users of prek (#1403)
• Improve JSON schema for repo field (#1432)
• Improve JSON schema for builtin and meta hooks (#1427)
• Add pronunciation entry to FAQ (#1442)
• Add commitizen to the list of projects using prek (#1413)
• Move docs to zensical (#1421)

Other Changes

• Refactor config layout (#1407)

... (truncated)

Changelog

Sourced from prek's changelog.

0.3.0

Released on 2026-01-22.

Highlights

• prek cache gc (also available via prek gc for pre-commit compatibility) is finally here! You can now run prek cache gc to clean up unused repos, hook envs and tool versions from prek cache.

• language: bun is now supported, making it possible to write and run hooks with Bun.

Enhancements

• Implement prek cache gc (#1410)

  • Bootstrap tracking configs from workspace cache (#1417)
  • Show total size prek cache gc removed (#1418)
  • Show accurate repo and hook details in prek cache gc -v (#1420)
  • prek cache gc remove specific unused tool versions (#1422)
  • Fix unused tool versions not removed in prek cache gc (#1436)

• Add language: bun support (#1411)

  • Use git ls-remote --tags to list bun versions (#1439)

• Accept --stage as an alias for --hook-stage in prek run (#1398)

• Expand ~ tilde in PREK_HOME (#1431)

• Support refs to trees (#1449)

Bug fixes

• Avoid file lock warning for in-process contention (#1406)
• Resolve relative repo paths from config file directory (#1443)
• fix: use split() instead of resolve(None) for builtin hook argument parsing (#1415)

Documentation

• Add simple-icons and ast-grep to the users of prek (#1403)
• Improve JSON schema for repo field (#1432)
• Improve JSON schema for builtin and meta hooks (#1427)
• Add pronunciation entry to FAQ (#1442)
• Add commitizen to the list of projects using prek (#1413)
• Move docs to zensical (#1421)

Other Changes

• Refactor config layout (#1407)

Contributors

... (truncated)

Commits

• da5ddd8 Bump version to 0.3.0
• 720c7cb Use git ls-remote --tags to list bun versions (#1439)
• 7d4ebbd Bootstrap config-tracking.json only when it is not exist (#1437)
• 34c1609 Fix unused tool versions not removed in prek cache gc (#1436)
• c34c41e Set GITHUB_TOKEN when running tests (#1426)
• 013a8ae Add more tests for prek cache gc (#1425)
• 8d46439 Add language: bun support (#1411)
• c30dbb8 prek cache gc remove specific unused tool versions (#1422)
• 5db9e47 Show accurate repo and hook details in prek cache gc -v (#1420)
• 96aab7e Show total size prek cache gc removed (#1418)
• Additional commits viewable in compare view

Updates setuptools-git-versioning from 2.1.0 to 3.0.1

Release notes

Sourced from setuptools-git-versioning's releases.

v3.0.1 (2026-01-16)

Bug Fixes

Fix OSErrorr exception raised if using setuptools-git-versioning in system without git installed (#126). Thanks to @​jeffawang.

v3.0.0 (2026-01-16)

Breaking

• Make most of args in version_from_git keyword-only.
• Change return type of version_from_git and infer_version from str to packaging.version.Version.
• Timestamps in version templates are now timezone-aware.

Refactoring

• Split setuptools_git_versioning.py into smaller set of files.
• Do not use Popen(shell=True) anymore.
• Switch from setup.py to pyproject.toml.
• Switch from pip to uv, use lock files.
• Switch from black + isort + pyupgrade to ruff format.
• Switch from flake8 to ruff.
• Switch from pre-commit to prek.

Bug Fixes

• Fix calling get_version(root=...) in combination with version-file strategy - relative file version was resolved against os.cwd, not explicitly passed root.
• Fix epoch versions like 0!2025.12.3 were wrongly converted to 0.2025.12.3 (#122).
• Using version_file-based schema with shallow git clone lead to version numbers like 1.2.3.postNone, now it is 1.2.3.post0 (#104).

Commits

• 3dc2692 Update CHANGELOG
• f29d36c Document Sphinx usage
• 8664843 Document Sphinx usage
• ce06e94 Restore common_issues docs entry
• 52bec5a Document ccount=0
• 529162d Add tests for missing/non-executable git
• 020870f Handle FileNotFoundError and OSError in _exec (v3.0.0) (#126)
• 50b5618 Fix min coverage check
• 84547e7 Fix README badges
• 06b39ea Get rid of CodeCov
• Additional commits viewable in compare view

Updates sphinx-design from 0.6.1 to 0.7.0

Release notes

Sourced from sphinx-design's releases.

v0.7.0

What's Changed

• 🧪 add regression test for available material icons by @​chrisjsewell in executablebooks/sphinx-design#224
• ⬆️ Update Material Design Icons to v4.0.0-116-ge9da21 by @​2bndy5 in executablebooks/sphinx-design#223
• 📚 Document muted, white, and black semantic colors by @​user27182 in executablebooks/sphinx-design#216
• ⬆️ Drop Python 3.9 & 3.10, support Python 3.14; Drop sphinx v6 by @​chrisjsewell in executablebooks/sphinx-design#250
• 🔧 Add AGENTS.md by @​chrisjsewell in executablebooks/sphinx-design#251
• 🔧 Remove unintended file by @​chrisjsewell in executablebooks/sphinx-design#252
• 🔧 Add copilot-setup-steps.yml workflow for GitHub Copilot coding agent by @​Copilot in executablebooks/sphinx-design#253
• 🔧 Add commit/pr info to AGENTS.md by @​chrisjsewell in executablebooks/sphinx-design#254
• ⬆️ Add Sphinx 9 support by @​chrisjsewell in executablebooks/sphinx-design#255
• 🚀 Release v0.7.0 by @​chrisjsewell in executablebooks/sphinx-design#256

New Contributors

• @​user27182 made their first contribution in executablebooks/sphinx-design#216
• @​Copilot made their first contribution in executablebooks/sphinx-design#253

Full Changelog: executablebooks/sphinx-design@v0.6.1...v0.7.0

Changelog

Sourced from sphinx-design's changelog.

0.7.0 - 2025-01-19

Dependencies

• ⬆️ Drop Python 3.9 & 3.10, support Python 3.14 by {user}chrisjsewell in {pr}250
• ⬆️ Drop Sphinx v6, add Sphinx v9 support by {user}chrisjsewell in {pr}250 and {pr}255
• ⬆️ Update Material Design Icons to v4.0.0-116-ge9da21 by {user}2bndy5 in {pr}223

Docs

• 📚 Document muted, white, and black semantic colors by {user}agriyakhetarpal in {pr}216

Commits

• 2e1bb52 🚀 Release v0.7.0 (#256)
• 6c906da ⬆️ Add Sphinx 9 support (#255)
• 6325b6f 🔧 Add commit/pr info to AGENTS.md (#254)
• 0b9c231 🔧 Add copilot-setup-steps.yml workflow for GitHub Copilot coding agent (#253)
• f2f1be8 🔧 Remove unintended file (#252)
• 5f9335a 🔧 Add AGENTS.md (#251)
• d8daebf ⬆️ Drop Python 3.9 & 3.10, support Python 3.14; Drop sphinx v6 (#250)
• b3d6edd 📚 Document muted, white, and black semantic colors (#216)
• 18afa33 ⬆️ Update Material Design Icons to v4.0.0-116-ge9da21 (#223)
• a726237 🧪 add regression test for available material icons (#224)
• See full diff in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

• @dependabot rebase will rebase this PR
• @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
• @dependabot merge will merge this PR after your CI passes on it
• @dependabot squash and merge will squash and merge this PR after your CI passes on it
• @dependabot cancel merge will cancel a previously requested merge and block automerging
• @dependabot reopen will reopen this PR if it is closed
• @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
• @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
• @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
• @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
• @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
• @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
• @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

[github-actions]

Coverage Report •

File	Stmts	Miss	Cover	Missing
TOTAL	5267	604	88%

report-only-changed-files is enabled. No files were changed during this commit :)