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Remove autofocus and drift from run_grid and added it to the protocol_commands. Also added these commands to all default protocols.
Graylevel selector was running on nomalized images where the brightest pixel was normalized to 255. This had for effect to make each square independent of the others and impossible to select a good range of graylevel throughout the grid.
Fixed issue where the target registration was off when the hole recentering isn't close enough to center. It should now calculate the offset and correct it when calculating the registration.
Selectors will now be run when manual targets are added.
Removed regular-pattern holes from lattice calculation. Users would normally have had to delete all the holes before running the lattice extension.
Protocol rework
Remove autofocus and drift from run_grid and added it to the protocol_commands. Also added these commands to all default protocols.
…nto protocol-rework
Protocol rework
Protocol rework
fix earlyreturn on falcon4
added delay before grabbing buffer
change default focusafterdistance value
remove symlink from preprocessing
fix process_from_avg
removing symlink
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