OBOFoundry · cthoyt · Jun 17, 2022 · Jun 17, 2022 · Jun 17, 2022 · Jun 17, 2022
diff --git a/ontology/aao.md b/ontology/aao.md
@@ -6,6 +6,7 @@ contact:
   email: david.c.blackburn@gmail.com
   label: David Blackburn
 domain: anatomy and development
+github_date_added: 2015-08-21
 homepage: http://github.com/seger/aao
 is_obsolete: true
 replaced_by: uberon

diff --git a/ontology/ado.md b/ontology/ado.md
@@ -11,6 +11,7 @@ dependencies:
 - id: bfo
 description: Alzheimer's Disease Ontology is a knowledge-based ontology that encompasses varieties of concepts related to Alzheimer'S Disease, structured by upper level Basic Formal Ontology(BFO). This Ontology is enriched by the interrelated entities that demonstrate the network of the understanding on Alzheimer's disease and can be readily applied for text mining.
 domain: health
+github_date_added: 2022-06-21
 homepage: https://github.com/Fraunhofer-SCAI-Applied-Semantics/ADO
 license:
   label: CC BY 4.0

diff --git a/ontology/adw.md b/ontology/adw.md
@@ -6,6 +6,7 @@ contact:
   email: adw_geeks@umich.edu
   label: Animal Diversity Web technical staff
 domain: organisms
+github_date_added: 2015-08-21
 homepage: http://www.animaldiversity.org
 is_obsolete: true
 activity_status: inactive

diff --git a/ontology/aeo.md b/ontology/aeo.md
@@ -12,6 +12,7 @@ contact:
   label: Jonathan Bard
 description: AEO is an ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: https://github.com/obophenotype/human-developmental-anatomy-ontology/
 license:
   label: CC BY 4.0

diff --git a/ontology/aero.md b/ontology/aero.md
@@ -11,6 +11,7 @@ contact:
   orcid: 0000-0002-9551-6370
 description: The Adverse Event Reporting Ontology (AERO) is an ontology aimed at supporting clinicians at the time of data entry, increasing quality and accuracy of reported adverse events
 domain: health
+github_date_added: 2015-07-28
 homepage: http://purl.obolibrary.org/obo/aero
 is_obsolete: true
 license:

diff --git a/ontology/agro.md b/ontology/agro.md
@@ -28,6 +28,7 @@ dependencies:
 - id: xco
 description: Ontology of agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments
 domain: agriculture
+github_date_added: 2016-06-04
 homepage: https://github.com/AgriculturalSemantics/agro
 jobs:
 - id: https://travis-ci.org/AgriculturalSemantics/agro

diff --git a/ontology/amphx.md b/ontology/amphx.md
@@ -15,6 +15,7 @@ dependencies:
 - id: uberon
 description: An ontology for the development and anatomy of Amphioxus (Branchiostoma lanceolatum).
 domain: anatomy and development
+github_date_added: 2020-04-21
 homepage: https://github.com/EBISPOT/amphx_ontology
 license:
   label: CC BY 3.0

diff --git a/ontology/apo.md b/ontology/apo.md
@@ -12,6 +12,7 @@ contact:
   orcid: 0000-0001-5472-917X
 description: A structured controlled vocabulary for the phenotypes of Ascomycete fungi
 domain: phenotype
+github_date_added: 2015-07-28
 homepage: http://www.yeastgenome.org/
 license:
   label: CC BY 4.0

diff --git a/ontology/aro.md b/ontology/aro.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0002-1142-3063
 description: Antibiotic resistance genes and mutations
 domain: microbiology
+github_date_added: 2017-11-15
 homepage: https://github.com/arpcard/aro
 license:
   label: CC BY 4.0

diff --git a/ontology/ato.md b/ontology/ato.md
@@ -6,6 +6,7 @@ contact:
   email: david.c.blackburn@gmail.com
   label: David Blackburn
 domain: organisms
+github_date_added: 2015-08-21
 homepage: http://www.amphibanat.org
 is_obsolete: true
 taxon:

diff --git a/ontology/bcgo.md b/ontology/bcgo.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0002-2999-0103
 description: An application ontology built for beta cell genomics studies.
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: https://github.com/obi-bcgo/bcgo
 in_foundry: false
 is_obsolete: true

diff --git a/ontology/bco.md b/ontology/bco.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0001-8815-0078
 description: An ontology to support the interoperability of biodiversity data, including data on museum collections, environmental/metagenomic samples, and ecological surveys.
 domain: organisms
+github_date_added: 2015-07-29
 homepage: https://github.com/BiodiversityOntologies/bco
 in_foundry: false
 license:

diff --git a/ontology/bfo.md b/ontology/bfo.md
@@ -14,6 +14,7 @@ contact:
 depicted_by: https://avatars2.githubusercontent.com/u/12972134?v=3&s=200
 description: The upper level ontology upon which OBO Foundry ontologies are built.
 domain: upper
+github_date_added: 2015-07-28
 homepage: http://ifomis.org/bfo/
 in_foundry_order: 1
 license:

diff --git a/ontology/bila.md b/ontology/bila.md
@@ -10,6 +10,7 @@ contact:
   email: henrich@embl.de
   label: Thorsten Heinrich
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: http://4dx.embl.de/4DXpress
 is_obsolete: true
 products:

diff --git a/ontology/bootstrep.md b/ontology/bootstrep.md
@@ -6,6 +6,7 @@ contact:
   email: vlee@ebi.ac.uk
   label: Vivian Lee
 domain: chemistry and biochemistry
+github_date_added: 2015-08-21
 homepage: http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html
 is_obsolete: true
 replaced_by: molecular_function

diff --git a/ontology/bspo.md b/ontology/bspo.md
@@ -15,6 +15,7 @@ contact:
   orcid: 0000-0002-6601-2165
 description: An ontology for representing spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: https://github.com/obophenotype/biological-spatial-ontology
 license:
   label: CC BY 3.0

diff --git a/ontology/bto.md b/ontology/bto.md
@@ -13,6 +13,7 @@ contact:
   orcid: 0000-0001-9117-7909
 description: A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures.
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: http://www.brenda-enzymes.org
 license:
   label: CC BY 4.0

diff --git a/ontology/caro.md b/ontology/caro.md
@@ -13,6 +13,7 @@ contact:
   orcid: 0000-0001-9114-8737
 description: An upper level ontology to facilitate interoperability between existing anatomy ontologies for different species
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: https://github.com/obophenotype/caro/
 license:
   label: CC BY 4.0

diff --git a/ontology/cdao.md b/ontology/cdao.md
@@ -12,6 +12,7 @@ contact:
   orcid: 0000-0002-8688-6599
 description: a formalization of concepts and relations relevant to evolutionary comparative analysis
 domain: organisms
+github_date_added: 2015-07-28
 homepage: https://github.com/evoinfo/cdao
 license:
   label: CC0 1.0

diff --git a/ontology/cdno.md b/ontology/cdno.md
@@ -19,6 +19,7 @@ dependencies:
 - id: ro
 description: CDNO provides structured terminologies to describe nutritional attributes of material entities that contribute to human diet.
 domain: diet, metabolomics, and nutrition
+github_date_added: 2021-02-08
 homepage: https://cdno.info/
 license:
   label: CC BY 3.0

diff --git a/ontology/ceph.md b/ontology/ceph.md
@@ -14,6 +14,7 @@ contact:
   orcid: 0000-0002-6601-2165
 description: An anatomical and developmental ontology for cephalopods
 domain: anatomy and development
+github_date_added: 2015-08-21
 homepage: https://github.com/obophenotype/cephalopod-ontology
 jobs:
 - id: https://travis-ci.org/obophenotype/cephalopod-ontology

diff --git a/ontology/chebi.md b/ontology/chebi.md
@@ -18,6 +18,7 @@ contact:
 depicted_by: https://www.ebi.ac.uk/chebi/images/ChEBI_logo.png
 description: A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds.
 domain: chemistry and biochemistry
+github_date_added: 2015-07-28
 homepage: http://www.ebi.ac.uk/chebi
 in_foundry_order: 1
 license:

diff --git a/ontology/cheminf.md b/ontology/cheminf.md
@@ -12,6 +12,7 @@ contact:
   orcid: 0000-0001-7542-0286
 description: Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them.
 domain: chemistry and biochemistry
+github_date_added: 2015-07-28
 homepage: https://github.com/semanticchemistry/semanticchemistry
 license:
   label: CC0 1.0

diff --git a/ontology/chiro.md b/ontology/chiro.md
@@ -21,6 +21,7 @@ dependencies:
 - id: uberon
 description: CHEBI provides a distinct role hierarchy. Chemicals in the structural hierarchy are connected via a 'has role' relation. CHIRO provides links from these roles to useful other classes in other ontologies. This will allow direct connection between chemical structures (small molecules, drugs) and what they do. This could be formalized using 'capable of', in the same way Uberon and the Cell Ontology link structures to processes.
 domain: chemistry and biochemistry
+github_date_added: 2019-09-26
 homepage: https://github.com/obophenotype/chiro
 jobs:
 - id: https://travis-ci.org/obophenotype/chiro

diff --git a/ontology/chmo.md b/ontology/chmo.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0001-5985-7429
 description: CHMO, the chemical methods ontology, describes methods used to
 domain: health
+github_date_added: 2015-07-28
 homepage: https://github.com/rsc-ontologies/rsc-cmo
 license:
   label: CC BY 4.0

diff --git a/ontology/cido.md b/ontology/cido.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0001-9189-9661
 description: The Coronavirus Infectious Disease Ontology (CIDO) aims to ontologically represent and standardize various aspects of coronavirus infectious diseases, including their etiology, transmission, epidemiology, pathogenesis, diagnosis, prevention, and treatment.
 domain: health
+github_date_added: 2020-03-12
 homepage: https://github.com/cido-ontology/cido
 license:
   label: CC BY 4.0

diff --git a/ontology/cio.md b/ontology/cio.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0002-9415-5104
 description: An ontology to capture confidence information about annotations.
 domain: information
+github_date_added: 2016-05-17
 homepage: https://github.com/BgeeDB/confidence-information-ontology
 license:
   label: CC0 1.0

diff --git a/ontology/cl.md b/ontology/cl.md
@@ -25,6 +25,7 @@ dependencies:
 depicted_by: /images/CL-logo.jpg
 description: The Cell Ontology is a structured controlled vocabulary for cell types in animals.
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: https://obophenotype.github.io/cell-ontology/
 integration_server: http://build.berkeleybop.org/job/build-cl/
 jobs:

diff --git a/ontology/clao.md b/ontology/clao.md
@@ -15,6 +15,7 @@ dependencies:
 - id: ro
 description: 'CLAO is an ontology of anatomical terms employed in morphological descriptions for the Class Collembola (Arthropoda: Hexapoda).'
 domain: anatomy and development
+github_date_added: 2020-10-08
 homepage: https://github.com/luis-gonzalez-m/Collembola
 license:
   label: CC0 1.0

diff --git a/ontology/clo.md b/ontology/clo.md
@@ -14,6 +14,7 @@ dependencies:
 - id: uberon
 description: An ontology to standardize and integrate cell line information and to support computer-assisted reasoning.
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: http://www.clo-ontology.org
 license:
   label: CC BY 3.0

diff --git a/ontology/clyh.md b/ontology/clyh.md
@@ -17,6 +17,7 @@ dependencies:
 - id: uberon
 description: The Clytia hemisphaerica Development and Anatomy Ontology (CLYH) describes the anatomical and developmental features of the Clytia hemisphaerica life cycle.
 domain: anatomy and development
+github_date_added: 2020-05-06
 homepage: https://github.com/EBISPOT/clyh_ontology
 license:
   label: CC BY 3.0

diff --git a/ontology/cmf.md b/ontology/cmf.md
@@ -7,6 +7,7 @@ contact:
   label: Mark Engelstad
   orcid: 0000-0001-5889-4463
 domain: health
+github_date_added: 2015-08-21
 homepage: https://code.google.com/p/craniomaxillofacial-ontology/
 is_obsolete: true
 activity_status: inactive

diff --git a/ontology/cmo.md b/ontology/cmo.md
@@ -17,6 +17,7 @@ contact:
 depicted_by: http://rgd.mcw.edu/common/images/rgd_LOGO_blue_rgd.gif
 description: Morphological and physiological measurement records generated from clinical and model organism research and health programs.
 domain: health
+github_date_added: 2015-07-28
 homepage: http://rgd.mcw.edu/rgdweb/ontology/search.html
 license:
   label: CC0 1.0

diff --git a/ontology/cob.md b/ontology/cob.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0002-8457-6693
 description: COB brings together key terms from a wide range of OBO projects to improve interoperability.
 domain: upper
+github_date_added: 2020-04-15
 homepage: https://obofoundry.org/COB/
 license:
   label: CC0 1.0

diff --git a/ontology/colao.md b/ontology/colao.md
@@ -17,6 +17,7 @@ dependencies:
 - id: uberon
 description: The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research. It has been built using the Ontology Develoment Kit, with the Ontology for the Anatomy of the Insect Skeleto-Muscular system (AISM) as a backbone.
 domain: anatomy and development
+github_date_added: 2021-12-14
 homepage: https://github.com/insect-morphology/colao
 license:
   label: CC BY 4.0

diff --git a/ontology/cro.md b/ontology/cro.md
@@ -13,6 +13,7 @@ contact:
   orcid: 0000-0001-5059-4132
 description: A classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provide transparency in contributions to scholarly published work, to enable improved systems of attribution, credit, and accountability.
 domain: information
+github_date_added: 2017-07-20
 homepage: https://github.com/data2health/contributor-role-ontology
 license:
   label: CC BY 2.0

diff --git a/ontology/cteno.md b/ontology/cteno.md
@@ -17,6 +17,7 @@ dependencies:
 - id: uberon
 description: An anatomical and developmental ontology for ctenophores (Comb Jellies)
 domain: anatomy and development
+github_date_added: 2015-07-29
 homepage: https://github.com/obophenotype/ctenophore-ontology
 jobs:
 - id: https://travis-ci.org/obophenotype/ctenophore-ontology

diff --git a/ontology/cto.md b/ontology/cto.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0001-9896-3531
 description: The core Ontology of Clinical Trials (CTO) will serve as a structured resource integrating basic terms and concepts in the context of clinical trials. Thereby covering clinicaltrails.gov. CoreCTO will serve as a basic ontology to generate extended versions for specific applications such as annotation of variables in study documents from clinical trials.
 domain: health
+github_date_added: 2020-07-08
 homepage: https://github.com/ClinicalTrialOntology/CTO/
 license:
   label: CC BY 4.0

diff --git a/ontology/cvdo.md b/ontology/cvdo.md
@@ -15,6 +15,7 @@ contact:
   orcid: 0000-0002-3336-2476
 description: An ontology to describe entities related to cardiovascular diseases
 domain: health
+github_date_added: 2015-07-28
 homepage: https://github.com/OpenLHS/CVDO
 license:
   label: CC BY 4.0

diff --git a/ontology/dc_cl.md b/ontology/dc_cl.md
@@ -7,6 +7,7 @@ contact:
   label: Lindsay Cowell
   orcid: 0000-0003-1617-8244
 domain: anatomy and development
+github_date_added: 2015-08-21
 homepage: http://www.dukeontologygroup.org/Projects.html
 is_obsolete: true
 replaced_by: cl

diff --git a/ontology/ddanat.md b/ontology/ddanat.md
@@ -13,6 +13,7 @@ contact:
   orcid: 0000-0002-4532-2703
 description: A structured controlled vocabulary of the anatomy of the slime-mold Dictyostelium discoideum
 domain: anatomy and development
+github_date_added: 2015-07-28
 homepage: http://dictybase.org/
 license:
   label: CC0 1.0

diff --git a/ontology/ddpheno.md b/ontology/ddpheno.md
@@ -13,6 +13,7 @@ contact:
   orcid: 0000-0002-4532-2703
 description: A structured controlled vocabulary of phenotypes of the slime-mould <i>Dictyostelium discoideum</i>.
 domain: anatomy and development
+github_date_added: 2015-08-21
 homepage: http://dictybase.org/
 license:
   label: CC0 1.0

diff --git a/ontology/dideo.md b/ontology/dideo.md
@@ -9,6 +9,7 @@ contact:
   orcid: 0000-0003-1834-3856
 description: The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology
 domain: chemistry and biochemistry
+github_date_added: 2015-08-21
 homepage: https://github.com/DIDEO/DIDEO
 license:
   label: CC BY 4.0

diff --git a/ontology/dinto.md b/ontology/dinto.md
@@ -7,6 +7,7 @@ contact:
   label: Maria Herrero
 description: A formal represention for drug-drug interactions knowledge.
 domain: health
+github_date_added: 2015-08-21
 homepage: http://labda.inf.uc3m.es/doku.php?id=es:labda_dinto
 is_obsolete: true
 license:

diff --git a/ontology/disdriv.md b/ontology/disdriv.md
@@ -15,6 +15,7 @@ contact:
   orcid: 0000-0001-8910-9851
 description: Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in collaboration with EnvO, ExO, ECTO and ChEBI.
 domain: health
+github_date_added: 2021-11-05
 homepage: http://www.disease-ontology.org
 license:
   label: CC0 1.0

diff --git a/ontology/doid.md b/ontology/doid.md
@@ -18,6 +18,7 @@ contact:
 depicted_by: http://www.disease-ontology.org/media/images/DO_logo.jpg
 description: An ontology for describing the classification of human diseases organized by etiology.
 domain: health
+github_date_added: 2015-07-28
 homepage: http://www.disease-ontology.org
 in_foundry_order: 1
 license:

diff --git a/ontology/dpo.md b/ontology/dpo.md
@@ -17,6 +17,7 @@ contact:
   orcid: 0000-0002-1373-1705
 description: An ontology of commonly encountered and/or high level Drosophila phenotypes.
 domain: phenotype
+github_date_added: 2015-07-28
 homepage: http://purl.obolibrary.org/obo/fbcv
 license:
   label: CC BY 4.0

diff --git a/ontology/dron.md b/ontology/dron.md
@@ -12,6 +12,7 @@ contact:
   orcid: 0000-0002-9881-1017
 description: An ontology to support comparative effectiveness researchers studying claims data.
 domain: health
+github_date_added: 2015-07-28
 homepage: https://github.com/ufbmi/dron
 license:
   label: CC BY 3.0

diff --git a/ontology/duo.md b/ontology/duo.md
@@ -16,6 +16,7 @@ dependencies:
 - id: iao
 description: DUO is an ontology which represent data use conditions.
 domain: information
+github_date_added: 2017-01-24
 homepage: https://github.com/EBISPOT/DUO
 jobs:
 - id: https://travis-ci.org/EBISPOT/DUO

diff --git a/ontology/ecao.md b/ontology/ecao.md
@@ -17,6 +17,7 @@ dependencies:
 - id: uberon
 description: An ontology for the development and anatomy of the different species of the phylum Echinodermata (NCBITaxon:7586).
 domain: anatomy and development
+github_date_added: 2020-05-06
 homepage: https://github.com/echinoderm-ontology/ecao_ontology
 license:
   label: CC BY 3.0